Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SNORA70.22-201ENST00000517160 124 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 CBX3P8-201ENST00000532412 525 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 AC023157.2-201ENST00000540596 141 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.76□□□□□ -2.29
CPNE4Q96A23 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.76□□□□□ -2.29
CPNE4Q96A23 MIR3684-201ENST00000579779 74 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 MIR4273-201ENST00000582824 84 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 AC080013.6-201ENST00000606185 215 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 AC100812.1-201ENST00000607622 580 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 MIR6079-201ENST00000635807 62 ntBASIC0.76□□□□□ -2.29
CPNE4Q96A23 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.76□□□□□ -2.29
CPNE4Q96A23 RNU6-1264P-201ENST00000383891 107 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 Y_RNA.450-201ENST00000384198 113 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 RNU6-842P-201ENST00000384269 107 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 RNU6-424P-201ENST00000384367 105 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 MIR19B1-201ENST00000384829 87 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 RNU6-1054P-201ENST00000411293 104 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 RNU2-64P-201ENST00000411315 191 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 USP9YP30-201ENST00000430729 455 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 STAG3L5P-204ENST00000443759 179 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 RPS27P22-201ENST00000478056 241 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.75□□□□□ -2.29
CPNE4Q96A23 AC010469.2-201ENST00000496412 480 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.75□□□□□ -2.29
CPNE4Q96A23 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 RNU1-54P-201ENST00000517181 120 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.75□□□□□ -2.29
CPNE4Q96A23 AC093023.1-201ENST00000547375 507 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 AC090049.2-201ENST00000550377 109 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 MIR5701-3-201ENST00000578890 82 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 MIR5701-1-201ENST00000585138 82 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 FAM106DP-201ENST00000586416 501 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 AC125232.2-201ENST00000592457 143 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 GHRLOS.1-201ENST00000610995 70 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 MIR5701-2-201ENST00000615634 82 ntBASIC0.75□□□□□ -2.29
CPNE4Q96A23 MIR373-201ENST00000362273 69 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 RNU6-222P-201ENST00000362438 107 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 RNU6-199P-201ENST00000362954 107 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 RNU6-1059P-201ENST00000363752 98 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 MIR562-201ENST00000384894 95 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 SNORD41-201ENST00000386967 70 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 SNORD12-201ENST00000391002 90 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 EIF1P2-201ENST00000428233 350 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 MTND4LP16-201ENST00000440828 295 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.74□□□□□ -2.29
CPNE4Q96A23 AC105758.1-201ENST00000506038 399 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 SNORA31.4-201ENST00000516049 129 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 RNU6-922P-201ENST00000516753 99 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 RNU7-28P-201ENST00000516759 62 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 RNU6-566P-201ENST00000516790 107 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 AL121579.1-201ENST00000555129 305 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.74□□□□□ -2.29
CPNE4Q96A23 AC090617.3-201ENST00000573670 475 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 MIR4698-201ENST00000577795 80 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 AC091178.2-201ENST00000584401 117 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 U4.5-201ENST00000617137 123 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.74□□□□□ -2.29
CPNE4Q96A23 MIR3662-201ENST00000637030 95 ntBASIC0.74□□□□□ -2.29
CPNE4Q96A23 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CPNE4Q96A23 MIR410-201ENST00000362222 80 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 RNU4-79P-201ENST00000362764 141 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 Y_RNA.106-201ENST00000363189 100 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 Y_RNA.226-201ENST00000364337 114 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 Y_RNA.301-201ENST00000364990 103 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 SNORA20B-201ENST00000384220 132 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 Y_RNA.554-201ENST00000384672 102 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 Y_RNA.573-201ENST00000384763 105 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 AL355796.1-201ENST00000406706 323 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 RNU6-1001P-201ENST00000411265 100 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.73□□□□□ -2.29
CPNE4Q96A23 OR9P1P-201ENST00000496431 281 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 SNORA31.2-201ENST00000516019 134 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 RNU6-720P-201ENST00000516363 108 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 RN7SKP49-201ENST00000516675 260 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 RNU6-273P-201ENST00000516937 96 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 RNU6-341P-201ENST00000516973 96 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 RNU7-172P-201ENST00000517125 64 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.73□□□□□ -2.29
CPNE4Q96A23 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 AC106754.2-201ENST00000623006 233 ntBASIC0.73□□□□□ -2.29
CPNE4Q96A23 AC008163.1-202ENST00000636004 2889 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CPNE4Q96A23 RNU6-623P-201ENST00000363143 105 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 Y_RNA.224-201ENST00000364308 111 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 Y_RNA.436-201ENST00000384097 102 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 MIR329-1-201ENST00000385028 80 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 MIR1287-201ENST00000408492 90 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 ELOCP21-201ENST00000412558 336 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 AL139396.1-201ENST00000421137 167 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 MTATP6P26-201ENST00000445926 662 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 AC018710.1-201ENST00000506509 158 ntBASIC0.72□□□□□ -2.29
CPNE4Q96A23 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 289.1 ms