Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RPL23AP50-201ENST00000434149 455 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.2□□□□□ -2.22
PTP4A1Q93096 RPS29P29-201ENST00000456396 171 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 RN7SKP49-201ENST00000516675 260 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 SNORA70.22-201ENST00000517160 124 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 MIR2355-201ENST00000517199 87 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 AC022868.1-201ENST00000517767 391 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 AC018448.1-201ENST00000552843 316 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 AC011712.1-201ENST00000588959 234 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.2□□□□□ -2.22
PTP4A1Q93096 AC073869.6-201ENST00000640656 341 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 MIR410-201ENST00000362222 80 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 RNA5SP99-201ENST00000364020 114 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 MIR520G-201ENST00000385064 90 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 SNORA17.3-201ENST00000391159 129 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 AL355796.1-201ENST00000406706 323 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 ELOCP21-201ENST00000412558 336 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.19□□□□□ -2.22
PTP4A1Q93096 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.19□□□□□ -2.22
PTP4A1Q93096 RPL39P39-201ENST00000455840 151 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 RNU6-625P-201ENST00000459412 107 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 AL133373.1-201ENST00000497098 94 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 AC105758.1-201ENST00000506038 399 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 Y_RNA.655-201ENST00000515919 96 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 RNA5SP168-201ENST00000516642 112 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 AC090049.2-201ENST00000550377 109 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 MIR4778-201ENST00000577635 80 ntBASIC1.19□□□□□ -2.22
PTP4A1Q93096 SNORA2.2-201ENST00000365473 135 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 RNU6-424P-201ENST00000384367 105 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 Y_RNA.557-201ENST00000384680 107 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 MIR873-201ENST00000401120 77 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 RNU4-62P-201ENST00000410125 130 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 AC092423.1-201ENST00000430165 186 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 AL353997.1-201ENST00000432936 108 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 Y_RNA.670-201ENST00000516255 105 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.18□□□□□ -2.22
PTP4A1Q93096 AC009229.3-201ENST00000608056 282 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.18□□□□□ -2.22
PTP4A1Q93096 AL133216.2-202ENST00000634512 349 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 MIR3674-201ENST00000636576 68 ntBASIC1.18□□□□□ -2.22
PTP4A1Q93096 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PTP4A1Q93096 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.17□□□□□ -2.22
PTP4A1Q93096 SNORD114-7-201ENST00000362520 77 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 MIR653-201ENST00000385279 96 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 FCF1P9-201ENST00000412546 282 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 AC108667.1-201ENST00000428618 249 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.17□□□□□ -2.22
PTP4A1Q93096 AC091021.1-201ENST00000468051 388 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 RNU7-12P-201ENST00000516030 62 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 RNU6-165P-201ENST00000517170 99 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 AL358944.1-201ENST00000528537 144 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 AC007014.2-201ENST00000615581 479 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 AC012676.2-201ENST00000619258 186 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 AC127459.3-201ENST00000624328 466 ntBASIC1.17□□□□□ -2.22
PTP4A1Q93096 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.16□□□□□ -2.22
PTP4A1Q93096 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 Y_RNA.358-201ENST00000365491 99 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.16□□□□□ -2.22
PTP4A1Q93096 RPL17P19-201ENST00000489069 552 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 AC116353.2-201ENST00000505332 712 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 AC011352.1-201ENST00000512300 793 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.16□□□□□ -2.22
PTP4A1Q93096 SNORD116-28-201ENST00000516123 91 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 AC060780.3-201ENST00000589464 80 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 AC092794.2-201ENST00000620933 563 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 AL359757.2-201ENST00000624309 274 ntBASIC1.16□□□□□ -2.22
PTP4A1Q93096 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
PTP4A1Q93096 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
PTP4A1Q93096 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
PTP4A1Q93096 SNORA12.1-201ENST00000390873 148 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 AL137792.2-201ENST00000443484 235 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 RNU1-123P-201ENST00000458950 160 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 SNORA31.2-201ENST00000516019 134 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 DNAJC19P9-201ENST00000555084 351 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 MIR4421-201ENST00000578133 69 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 AC091178.2-201ENST00000584401 117 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 AP000942.3-201ENST00000603702 160 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 U6.115-201ENST00000636045 103 ntBASIC1.15□□□□□ -2.23
PTP4A1Q93096 RNA5SP361-201ENST00000362686 118 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 Y_RNA.473-201ENST00000384333 102 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 SNORD12-201ENST00000391002 90 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 RNU6-1054P-201ENST00000411293 104 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 AC114482.1-201ENST00000418010 247 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.14□□□□□ -2.23
PTP4A1Q93096 CALM2P4-201ENST00000430810 426 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.14□□□□□ -2.23
PTP4A1Q93096 AC009474.2-201ENST00000451383 136 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 AL049830.1-201ENST00000468034 425 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 OR9P1P-201ENST00000496431 281 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms