Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNY3P16-201ENST00000516338 101 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 RNU6-1212P-201ENST00000517023 104 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 MIR6895-201ENST00000613497 78 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.86□□□□□ -1.95
ERCC4Q92889 AC080100.1-201ENST00000624239 5356 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
ERCC4Q92889 RNA5SP240-201ENST00000365355 128 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 SNORA72.4-201ENST00000384174 132 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 Y_RNA.456-201ENST00000384232 111 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 RNU6-1235P-201ENST00000384559 107 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 RPS12P2-201ENST00000439728 269 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 RPL23AP7-203ENST00000449021 469 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.85□□□□□ -1.95
ERCC4Q92889 U8.19-201ENST00000459095 133 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 RNU6-498P-201ENST00000459468 107 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 SNORA70.12-201ENST00000516084 153 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 RNU6-965P-201ENST00000516721 96 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 PRELID2P1-201ENST00000552837 301 ntBASIC2.85□□□□□ -1.95
ERCC4Q92889 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.85□□□□□ -1.95
ERCC4Q92889 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ERCC4Q92889 AC068700.1-201ENST00000565862 3754 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ERCC4Q92889 Y_RNA.332-201ENST00000365271 113 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 SNORA20B-201ENST00000384220 132 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 Y_RNA.500-201ENST00000384466 111 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 MIR873-201ENST00000401120 77 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 MTCO1P44-201ENST00000441935 243 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 AC016717.1-201ENST00000448918 286 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 AC011753.1-201ENST00000451001 220 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 RNU6-948P-201ENST00000516374 107 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 RNU2-34P-201ENST00000516534 121 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 RNU6-861P-201ENST00000516745 106 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 RNA5SP402-201ENST00000517148 110 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 SUMO2P18-201ENST00000518873 252 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 IGLV3-17-201ENST00000519099 244 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 AC022559.1-201ENST00000520905 205 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.84□□□□□ -1.95
ERCC4Q92889 AC025754.2-201ENST00000606491 432 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 AL137847.3-201ENST00000611521 109 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.84□□□□□ -1.95
ERCC4Q92889 U6.106-201ENST00000636360 105 ntBASIC2.84□□□□□ -1.95
ERCC4Q92889 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.84□□□□□ -1.96
ERCC4Q92889 SNORA27.1-201ENST00000362604 124 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 Y_RNA.124-201ENST00000363339 93 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 Y_RNA.233-201ENST00000364407 101 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 MIR9-1-201ENST00000385198 89 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 RNA5SP184-201ENST00000411071 108 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 AL121890.1-201ENST00000435457 205 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 HSPE1P13-201ENST00000451143 297 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 SNORD65B-201ENST00000459126 73 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 AC018868.1-201ENST00000491307 315 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.83□□□□□ -1.96
ERCC4Q92889 AC093259.1-201ENST00000509755 300 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 AC010598.1-201ENST00000510378 103 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 AC025647.1-201ENST00000517879 253 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 AC100767.1-201ENST00000528178 123 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 MIR5092-201ENST00000583139 88 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 AC013791.1-201ENST00000616619 62 ntBASIC2.83□□□□□ -1.96
ERCC4Q92889 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ERCC4Q92889 MIR340-201ENST00000362125 95 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 Y_RNA.240-201ENST00000364469 95 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 RNU6-923P-201ENST00000364753 107 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 Y_RNA.308-201ENST00000365043 101 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 RNU1-51P-201ENST00000365345 176 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 SNORD14D-201ENST00000384390 87 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 SNORA80E-201ENST00000384744 137 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 AL355497.1-201ENST00000406262 551 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 AL357139.1-201ENST00000407792 426 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 AC016909.1-201ENST00000415916 166 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 AC063976.3-201ENST00000426849 329 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 AC010531.2-201ENST00000465012 153 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.82□□□□□ -1.96
ERCC4Q92889 HMGB3P3-201ENST00000510526 400 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 RNA5SP490-201ENST00000517141 136 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.82□□□□□ -1.96
ERCC4Q92889 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.82□□□□□ -1.96
ERCC4Q92889 MIR6852-201ENST00000621699 66 ntBASIC2.82□□□□□ -1.96
ERCC4Q92889 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.82□□□□□ -1.96
ERCC4Q92889 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ERCC4Q92889 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.82□□□□□ -1.96
ERCC4Q92889 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
ERCC4Q92889 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ERCC4Q92889 Y_RNA.287-201ENST00000364853 94 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 RNU6-418P-201ENST00000384035 107 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 RNU6-493P-201ENST00000391321 108 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 RNU6-855P-201ENST00000410395 104 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 RNU2-63P-201ENST00000410792 194 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 RNU6-57P-201ENST00000411348 103 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.81□□□□□ -1.96
ERCC4Q92889 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.81□□□□□ -1.96
ERCC4Q92889 AL357134.1-201ENST00000445848 426 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 AL137159.1-201ENST00000452808 512 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 RNU7-26P-201ENST00000458980 63 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.81□□□□□ -1.96
ERCC4Q92889 AC087441.2-201ENST00000529141 262 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 AC121758.2-201ENST00000553271 193 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 MIR4319-201ENST00000577285 85 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms