Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC027288.2-201ENST00000553028 243 ntBASIC0.1□□□□□ -2.39
TOPBP1Q92547 MIR548AB-201ENST00000584917 84 ntBASIC0.1□□□□□ -2.39
TOPBP1Q92547 AL022161.1-201ENST00000604390 213 ntBASIC0.1□□□□□ -2.39
TOPBP1Q92547 AP002371.2-201ENST00000624450 503 ntBASIC0.1□□□□□ -2.39
TOPBP1Q92547 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.39
TOPBP1Q92547 MIRLET7D-201ENST00000362263 87 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 Y_RNA.35-201ENST00000362601 101 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 RNU6-137P-201ENST00000363680 108 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 SNORD113.3-201ENST00000364630 78 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 RNU6-606P-201ENST00000384721 111 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 MIR526A1-201ENST00000384897 85 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 SNX3P1X-201ENST00000414887 175 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.09□□□□□ -2.39
TOPBP1Q92547 MTND1P5-201ENST00000517906 940 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 AC104383.1-201ENST00000530297 370 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 AC245014.2-201ENST00000603689 287 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 AC246785.4-201ENST00000605374 287 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.09□□□□□ -2.39
TOPBP1Q92547 MIR1-1-201ENST00000362147 71 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 MIR411-201ENST00000362239 96 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 RNU6-181P-201ENST00000363225 107 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 MIR620-201ENST00000385232 95 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 SNORA40.3-201ENST00000390964 122 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 AL593851.1-201ENST00000426171 157 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.08□□□□□ -2.4
TOPBP1Q92547 HMGN2P22-201ENST00000427588 175 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.08□□□□□ -2.4
TOPBP1Q92547 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.08□□□□□ -2.4
TOPBP1Q92547 RNU6-445P-201ENST00000516949 107 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 RNU6-341P-201ENST00000516973 96 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.08□□□□□ -2.4
TOPBP1Q92547 AK6P2-201ENST00000549020 471 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 MIR4300-201ENST00000581016 96 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 AC091178.2-201ENST00000584401 117 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 AC104695.3-201ENST00000604052 296 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 AP001506.1-201ENST00000615444 211 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 RNY3-201ENST00000365484 102 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 MIR520C-201ENST00000385005 87 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 MIR140-201ENST00000385282 100 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 RNU6-994P-201ENST00000410507 111 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 MTCO2P8-201ENST00000412213 658 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.08□□□□□ -2.4
TOPBP1Q92547 RNU6-1116P-201ENST00000517269 99 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 AC093027.1-201ENST00000546698 429 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.08□□□□□ -2.4
TOPBP1Q92547 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.08□□□□□ -2.4
TOPBP1Q92547 AC006435.5-201ENST00000624486 112 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
TOPBP1Q92547 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
TOPBP1Q92547 MIR103A1-201ENST00000362165 78 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 SNORA1B-201ENST00000362535 133 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 SNORD118-201ENST00000363593 134 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 RNU6-784P-201ENST00000384330 106 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 HSFY5P-201ENST00000453726 309 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 AC010598.1-201ENST00000510378 103 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 RNU6-311P-201ENST00000516224 102 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 RNU7-172P-201ENST00000517125 64 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 MTND4P7-201ENST00000523876 130 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 SCOCP1-201ENST00000554676 349 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 RNU6-94P-201ENST00000607728 107 ntBASIC0.07□□□□□ -2.4
TOPBP1Q92547 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TOPBP1Q92547 SNORD44.1-201ENST00000363202 61 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 Y_RNA.336-201ENST00000365307 109 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 RNY1P8-201ENST00000383970 114 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 RNU6-517P-201ENST00000384362 110 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 MIR153-2-201ENST00000385225 87 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 RNA5SP219-201ENST00000390940 113 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 AL049545.1-201ENST00000401856 572 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 RNU2-9P-201ENST00000410194 145 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 RNU6-177P-201ENST00000411257 104 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.06□□□□□ -2.4
TOPBP1Q92547 AC091021.1-201ENST00000468051 388 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 AC107401.1-201ENST00000503426 685 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 AP002004.2-201ENST00000531656 154 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 MTND1P8-201ENST00000571424 950 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 MIR4645-201ENST00000583158 77 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 MIR8076-201ENST00000611401 83 ntBASIC0.06□□□□□ -2.4
TOPBP1Q92547 RNU6-1214P-201ENST00000363650 109 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 RNU6-282P-201ENST00000365357 103 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 RNU6-1329P-201ENST00000365664 107 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 Y_RNA.551-201ENST00000384661 102 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 MIR450B-201ENST00000401182 78 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 MTCO3P19-201ENST00000415864 321 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.05□□□□□ -2.4
TOPBP1Q92547 MRPS10P1-201ENST00000448483 130 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 AC104576.1-201ENST00000524225 88 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 HIF1AP1-201ENST00000553642 175 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 AC011458.1-201ENST00000604034 617 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 AL162730.1-201ENST00000605734 292 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 uc_338.34-201ENST00000617467 174 ntBASIC0.05□□□□□ -2.4
TOPBP1Q92547 RNU6-727P-201ENST00000363592 107 ntBASIC0.04□□□□□ -2.4
TOPBP1Q92547 SNORD115-8-201ENST00000363856 82 ntBASIC0.04□□□□□ -2.4
TOPBP1Q92547 SNORD115-38-201ENST00000365037 82 ntBASIC0.04□□□□□ -2.4
TOPBP1Q92547 Y_RNA.560-201ENST00000384689 102 ntBASIC0.04□□□□□ -2.4
TOPBP1Q92547 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
TOPBP1Q92547 MIR1827-201ENST00000408549 66 ntBASIC0.04□□□□□ -2.4
TOPBP1Q92547 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.04□□□□□ -2.4
TOPBP1Q92547 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.04□□□□□ -2.4
TOPBP1Q92547 ZNF885P-201ENST00000420174 1098 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms