Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC197Q8NCU1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC197Q8NCU1 AP001485.1-201ENST00000604799 199 ntBASIC1.36□□□□□ -2.19
CCDC197Q8NCU1 AC018630.2-201ENST00000534866 2403 ntBASIC1.36□□□□□ -2.19
CCDC197Q8NCU1 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 U8.2-201ENST00000363156 134 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RNU6-961P-201ENST00000363893 105 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RNA5SP475-201ENST00000410568 110 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 AC099799.1-201ENST00000439809 192 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RNU7-94P-201ENST00000459576 63 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RNU6-408P-201ENST00000515910 100 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RNA5SP20-201ENST00000515976 84 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RNU6-911P-201ENST00000516523 104 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 RNU7-172P-201ENST00000517125 64 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 AC093027.1-201ENST00000546698 429 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 AC091544.4-201ENST00000555268 342 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 AC084781.2-201ENST00000615568 161 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 U2.1-201ENST00000618978 145 ntBASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC197Q8NCU1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RNU6-1115P-201ENST00000362490 106 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 Y_RNA.314-201ENST00000365114 102 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RNU6-407P-201ENST00000365280 104 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 Y_RNA.463-201ENST00000384271 102 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RNU6-440P-201ENST00000390882 105 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RN7SKP200-201ENST00000410564 320 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 MTCO2P27-201ENST00000420740 428 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 AF228730.4-201ENST00000421457 183 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 SDAD1P3-201ENST00000427380 333 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 AC027119.1-201ENST00000440877 241 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 AL137792.2-201ENST00000443484 235 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 FCF1P4-201ENST00000448326 183 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 CHEK2P4-201ENST00000450340 246 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 RNU2-12P-201ENST00000517216 168 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 MIR6079-201ENST00000635807 62 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 AC112487.2-201ENST00000637950 304 ntBASIC1.34□□□□□ -2.19
CCDC197Q8NCU1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 MIR873-201ENST00000401120 77 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 MRPL35P1-201ENST00000404272 572 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 SNORA3.2-201ENST00000408221 125 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.605-201ENST00000410577 105 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 SUMO1P2-201ENST00000452524 304 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 AC079140.2-201ENST00000506193 142 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 AL117351.2-201ENST00000513571 157 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 AC055872.1-201ENST00000570978 278 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 AC091178.2-201ENST00000584401 117 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 AC091925.1-201ENST00000623204 462 ntBASIC1.33□□□□□ -2.2
CCDC197Q8NCU1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 MIR449A-201ENST00000362113 91 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 SNORD114-7-201ENST00000362520 77 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 RNU6-117P-201ENST00000365415 107 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.356-201ENST00000365475 113 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 RNU6-926P-201ENST00000384075 107 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 MIR513A1-201ENST00000385138 129 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 SNORD78.2-201ENST00000391076 69 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 RPL30P13-201ENST00000418873 348 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 AC023442.1-201ENST00000531247 422 ntBASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.32□□□□□ -2.2
CCDC197Q8NCU1 SNORD33-201ENST00000362761 85 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 SNORD115-30-201ENST00000364117 82 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.500-201ENST00000384466 111 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 MIR504-201ENST00000385065 83 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 AL627390.1-201ENST00000396055 340 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 AC096644.2-201ENST00000429278 159 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms