Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 U6.92-201ENST00000636464 89 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU6-961P-201ENST00000363893 105 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 SNORA72.2-201ENST00000365028 127 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 Y_RNA.424-201ENST00000384063 103 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 SUMO2P12-201ENST00000405924 140 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 AC016909.1-201ENST00000415916 166 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 MTND2P29-201ENST00000438595 412 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 MTND4P19-201ENST00000446659 478 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 AC010469.2-201ENST00000496412 480 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 SNORA25.10-201ENST00000515926 124 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.12□□□□□ -2.07
USP38Q8NB14 SNRPGP19-201ENST00000603826 189 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 MIR3674-201ENST00000636576 68 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.12□□□□□ -2.07
USP38Q8NB14 AC005592.1-201ENST00000566527 1640 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 snoU2-30.2-201ENST00000362805 70 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 Y_RNA.374-201ENST00000365606 101 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 MIR548P-201ENST00000408336 84 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 PMCHL1-202ENST00000423102 261 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 AL353689.1-201ENST00000438895 199 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 RNU7-95P-201ENST00000459222 64 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USP38Q8NB14 AC107393.1-201ENST00000512403 346 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.11□□□□□ -2.07
USP38Q8NB14 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.11□□□□□ -2.07
USP38Q8NB14 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.11□□□□□ -2.07
USP38Q8NB14 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.11□□□□□ -2.07
USP38Q8NB14 AC022513.1-201ENST00000624512 117 ntBASIC2.11□□□□□ -2.07
USP38Q8NB14 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.11□□□□□ -2.07
USP38Q8NB14 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
USP38Q8NB14 Y_RNA.216-201ENST00000364205 93 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 SNORD14.1-201ENST00000365609 90 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 SNORA48.1-201ENST00000390879 135 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
USP38Q8NB14 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.1□□□□□ -2.07
USP38Q8NB14 SNORA40.14-201ENST00000516543 86 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 RNU6-1012P-201ENST00000516606 109 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 AC240442.1-201ENST00000616055 283 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 MIR338-201ENST00000636369 67 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
USP38Q8NB14 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
USP38Q8NB14 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.09□□□□□ -2.07
USP38Q8NB14 Y_RNA.28-201ENST00000362554 111 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 Y_RNA.148-201ENST00000363557 117 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 Y_RNA.191-201ENST00000363972 113 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 Y_RNA.327-201ENST00000365201 102 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 RNU6-1310P-201ENST00000384153 107 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 RNA5SP323-201ENST00000391094 133 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.09□□□□□ -2.07
USP38Q8NB14 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 AC099677.2-201ENST00000436385 175 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.09□□□□□ -2.07
USP38Q8NB14 RPL23AP6-201ENST00000446637 472 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 AC040926.1-201ENST00000530195 238 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 AP002001.1-203ENST00000534002 267 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 MIR3171-201ENST00000584270 74 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 AC004467.1-201ENST00000615678 330 ntBASIC2.09□□□□□ -2.07
USP38Q8NB14 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
USP38Q8NB14 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
USP38Q8NB14 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
USP38Q8NB14 RNU6-626P-201ENST00000363354 107 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 SNORA22B-201ENST00000383876 138 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 RNU6-20P-201ENST00000384106 107 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 RNA5SP467-201ENST00000391274 118 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.08□□□□□ -2.08
USP38Q8NB14 RNU6-1186P-201ENST00000410429 97 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 AL354751.2-201ENST00000415471 210 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 AL158823.1-201ENST00000418441 478 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USP38Q8NB14 MIR4452-201ENST00000583004 71 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.08□□□□□ -2.08
USP38Q8NB14 AL356055.1-201ENST00000602528 446 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 AL390123.1-201ENST00000603216 237 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 AC069114.2-201ENST00000604699 304 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 MIR6734-201ENST00000621166 68 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 uc_338.20-201ENST00000621563 178 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 AC084768.2-201ENST00000622736 221 ntBASIC2.08□□□□□ -2.08
USP38Q8NB14 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.08□□□□□ -2.08
USP38Q8NB14 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USP38Q8NB14 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USP38Q8NB14 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USP38Q8NB14 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
USP38Q8NB14 Y_RNA.287-201ENST00000364853 94 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 RNU6-392P-201ENST00000364926 101 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 Y_RNA.471-201ENST00000384312 102 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 Y_RNA.526-201ENST00000384572 110 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USP38Q8NB14 RNU2-7P-201ENST00000410794 178 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 SDAD1P3-201ENST00000427380 333 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
USP38Q8NB14 RPL23AP3-201ENST00000453844 468 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 SNORD65B-201ENST00000459126 73 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 RPS27P22-201ENST00000478056 241 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms