Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 AC104985.2-201ENST00000620598 500 ntBASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 AC027575.1-201ENST00000481064 460 ntBASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 RNA5SP437-201ENST00000517249 129 ntBASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 AC006600.1-201ENST00000572529 153 ntBASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 MIR3198-2-201ENST00000577868 80 ntBASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 MIR4421-201ENST00000578133 69 ntBASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 AC010900.2-201ENST00000604508 210 ntBASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC60Q8IWA6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.315-201ENST00000365117 102 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.419-201ENST00000384041 102 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 RNU6-321P-201ENST00000410912 106 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 EBAG9P1-201ENST00000418955 543 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 RAB28P5-201ENST00000427490 651 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 CHEK2P4-201ENST00000450340 246 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 RNU6-408P-201ENST00000515910 100 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AP002001.1-203ENST00000534002 267 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AC023157.2-201ENST00000540596 141 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AL442163.3-201ENST00000554110 156 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AC022432.1-201ENST00000595739 310 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AL359821.1-201ENST00000605519 182 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AL133255.1-201ENST00000606374 441 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 AC138305.3-201ENST00000624988 240 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 MIR3674-201ENST00000636576 68 ntBASIC1.59□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.4-201ENST00000362333 112 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 SNORA72.2-201ENST00000365028 127 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 RNU6-708P-201ENST00000384217 107 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.496-201ENST00000384444 101 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 MIR515-2-201ENST00000384883 83 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 MIR515-1-201ENST00000384884 83 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 MIR30A-201ENST00000385092 71 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 RNA5SP475-201ENST00000410568 110 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AC004965.1-201ENST00000413033 213 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AC005002.2-201ENST00000438228 269 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 HSPE1P9-201ENST00000440046 311 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AC073910.1-201ENST00000445047 438 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 SNORD65B-201ENST00000459126 73 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 RPS27P22-201ENST00000478056 241 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 HMGN1P13-201ENST00000505795 138 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 RNU1-142P-201ENST00000516682 145 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 RNU1-92P-201ENST00000517017 135 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AL137100.2-201ENST00000555786 315 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AC092447.9-201ENST00000603395 144 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AC016925.2-201ENST00000605108 242 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AL359075.3-201ENST00000613288 217 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 AC011476.5-201ENST00000615594 130 ntBASIC1.58□□□□□ -2.16
CCDC60Q8IWA6 U8.1-201ENST00000362843 134 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 SNORA7.1-201ENST00000363750 139 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 RNY3P4-201ENST00000384428 101 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 SNORD78.2-201ENST00000391076 69 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 AC069257.2-201ENST00000441819 155 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 FCF1P4-201ENST00000448326 183 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 AL163540.1-201ENST00000485382 386 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 RPL36AP21-201ENST00000490372 323 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 AC010469.2-201ENST00000496412 480 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 AL163195.1-201ENST00000496941 348 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 RNU6-976P-201ENST00000516086 111 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 MIR4438-201ENST00000585271 93 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 VN1R91P-201ENST00000594377 169 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 MIR4272-201ENST00000635924 64 ntBASIC1.57□□□□□ -2.16
CCDC60Q8IWA6 MIR424-201ENST00000362227 98 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.5-201ENST00000362334 102 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.39-201ENST00000362620 98 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 RNU6-961P-201ENST00000363893 105 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 SNORA63D-201ENST00000364359 132 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 SNORA20B-201ENST00000384220 132 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.604-201ENST00000410574 102 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 AC005840.1-201ENST00000498412 377 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 AC010598.1-201ENST00000510378 103 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 RNU6-1170P-201ENST00000515974 106 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 AC023442.1-201ENST00000531247 422 ntBASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC60Q8IWA6 MIR369-201ENST00000362155 70 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.197-201ENST00000364004 102 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 RNU6-407P-201ENST00000365280 104 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms