Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.81□□□□□ -1.96
DDX53Q86TM3 SNORD53-201ENST00000579969 78 ntBASIC2.81□□□□□ -1.96
DDX53Q86TM3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.8□□□□□ -1.96
DDX53Q86TM3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX53Q86TM3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 SNORA70B-201ENST00000384210 135 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC010409.1-201ENST00000487382 476 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 SNORA9.3-201ENST00000516383 129 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 RNA5SP24-201ENST00000516478 95 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC087441.2-201ENST00000529141 262 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 MIR7843-201ENST00000622274 79 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC064859.1-201ENST00000624741 174 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX53Q86TM3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC134026.1-201ENST00000623249 2239 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 MIR411-201ENST00000362239 96 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 SNORD114-6-201ENST00000364393 72 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 MIR1253-201ENST00000408273 105 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 RNU2-64P-201ENST00000411315 191 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX53Q86TM3 COX6CP14-201ENST00000469580 174 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 RPS27P22-201ENST00000478056 241 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX53Q86TM3 SNORA81.3-201ENST00000517283 198 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 AC024405.2-202ENST00000532731 184 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 CYCSP26-201ENST00000534107 320 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 AC022202.1-201ENST00000613515 211 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 AL159152.1-201ENST00000635019 2587 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AL161431.1-201ENST00000618966 4205 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AL356292.1-201ENST00000283110 373 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 SNORA38-201ENST00000363946 132 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 SNORA72.4-201ENST00000384174 132 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 Y_RNA.785-201ENST00000384290 109 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 MIR27B-201ENST00000385129 97 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX53Q86TM3 EDDM3CP-201ENST00000415977 425 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 RPS29P6-201ENST00000438196 145 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX53Q86TM3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 MIR4769-201ENST00000584126 77 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.15-201ENST00000611544 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.16-201ENST00000613119 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.12-201ENST00000613778 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.20-201ENST00000613956 192 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.9-201ENST00000615427 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AL078604.3-201ENST00000615580 211 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.11-201ENST00000616345 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.2-201ENST00000616535 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.3-201ENST00000617785 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.19-201ENST00000618602 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 RNU2-1-201ENST00000618664 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.6-201ENST00000619225 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.5-201ENST00000619465 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.10-201ENST00000620268 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AC006435.5-201ENST00000624486 112 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX53Q86TM3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
DDX53Q86TM3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
DDX53Q86TM3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX53Q86TM3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
DDX53Q86TM3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX53Q86TM3 Y_RNA.29-201ENST00000362570 113 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 SNORD116-13-201ENST00000384408 92 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 MTCO2P33-201ENST00000402100 465 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX53Q86TM3 CR769767.1-201ENST00000436337 346 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 HMGN2P34-201ENST00000437647 269 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX53Q86TM3 HSPE1P13-201ENST00000451143 297 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 RPS20P10-201ENST00000451209 253 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 AL138752.1-201ENST00000452964 351 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 AC011406.1-201ENST00000512440 370 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 RNU6-63P-201ENST00000516690 95 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX53Q86TM3 MIR4524B-201ENST00000581569 115 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 MIR4635-201ENST00000583759 79 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 U4.3-201ENST00000621047 82 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX53Q86TM3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX53Q86TM3 SNORD115-3-201ENST00000363100 82 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNU1-148P-201ENST00000384472 162 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNU6-160P-201ENST00000384591 107 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 Y_RNA.793-201ENST00000411222 111 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms