Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.81□□□□□ -1.96
DDX53Q86TM3 SNORD53-201ENST00000579969 78 ntBASIC2.81□□□□□ -1.96
DDX53Q86TM3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.8□□□□□ -1.96
DDX53Q86TM3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX53Q86TM3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 SNORA70B-201ENST00000384210 135 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC010409.1-201ENST00000487382 476 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 SNORA9.3-201ENST00000516383 129 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 RNA5SP24-201ENST00000516478 95 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC087441.2-201ENST00000529141 262 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 MIR7843-201ENST00000622274 79 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC064859.1-201ENST00000624741 174 ntBASIC2.8□□□□□ -1.96
DDX53Q86TM3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX53Q86TM3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX53Q86TM3 AC134026.1-201ENST00000623249 2239 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 MIR411-201ENST00000362239 96 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 SNORD114-6-201ENST00000364393 72 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 MIR1253-201ENST00000408273 105 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 RNU2-64P-201ENST00000411315 191 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX53Q86TM3 COX6CP14-201ENST00000469580 174 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 RPS27P22-201ENST00000478056 241 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX53Q86TM3 SNORA81.3-201ENST00000517283 198 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 AC024405.2-202ENST00000532731 184 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 CYCSP26-201ENST00000534107 320 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 AC022202.1-201ENST00000613515 211 ntBASIC2.79□□□□□ -1.96
DDX53Q86TM3 AL159152.1-201ENST00000635019 2587 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AL161431.1-201ENST00000618966 4205 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AL356292.1-201ENST00000283110 373 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 SNORA38-201ENST00000363946 132 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 SNORA72.4-201ENST00000384174 132 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 Y_RNA.785-201ENST00000384290 109 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 MIR27B-201ENST00000385129 97 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX53Q86TM3 EDDM3CP-201ENST00000415977 425 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 RPS29P6-201ENST00000438196 145 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX53Q86TM3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 MIR4769-201ENST00000584126 77 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.15-201ENST00000611544 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.16-201ENST00000613119 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.12-201ENST00000613778 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.20-201ENST00000613956 192 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.9-201ENST00000615427 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AL078604.3-201ENST00000615580 211 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.11-201ENST00000616345 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.2-201ENST00000616535 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.3-201ENST00000617785 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.19-201ENST00000618602 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 RNU2-1-201ENST00000618664 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.6-201ENST00000619225 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.5-201ENST00000619465 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 U2.10-201ENST00000620268 191 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 AC006435.5-201ENST00000624486 112 ntBASIC2.78□□□□□ -1.96
DDX53Q86TM3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX53Q86TM3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
DDX53Q86TM3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
DDX53Q86TM3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX53Q86TM3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
DDX53Q86TM3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX53Q86TM3 Y_RNA.29-201ENST00000362570 113 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 SNORD116-13-201ENST00000384408 92 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 MTCO2P33-201ENST00000402100 465 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX53Q86TM3 CR769767.1-201ENST00000436337 346 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 HMGN2P34-201ENST00000437647 269 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX53Q86TM3 HSPE1P13-201ENST00000451143 297 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 RPS20P10-201ENST00000451209 253 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 AL138752.1-201ENST00000452964 351 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 AC011406.1-201ENST00000512440 370 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 RNU6-63P-201ENST00000516690 95 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX53Q86TM3 MIR4524B-201ENST00000581569 115 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 MIR4635-201ENST00000583759 79 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 U4.3-201ENST00000621047 82 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
DDX53Q86TM3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX53Q86TM3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX53Q86TM3 SNORD115-3-201ENST00000363100 82 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNU1-148P-201ENST00000384472 162 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNU6-160P-201ENST00000384591 107 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 Y_RNA.793-201ENST00000411222 111 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms