Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 UBE2WP1-201ENST00000362030 340 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.136-201ENST00000363444 102 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 RNU6-682P-201ENST00000363843 106 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 MIR518C-201ENST00000384822 101 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 MIR144-201ENST00000384886 86 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 RN7SKP223-201ENST00000410582 62 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 RN7SKP51-201ENST00000410781 304 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 AC009238.1-201ENST00000442165 424 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 AC009237.6-201ENST00000446969 424 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 AC005042.3-201ENST00000453230 174 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 snoU13.23-201ENST00000458863 104 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 AC074133.1-201ENST00000515696 183 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 RNA5SP82-201ENST00000516707 92 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 RNU6-255P-201ENST00000516957 105 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 MIR4282-201ENST00000583613 67 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 AC022202.1-201ENST00000613515 211 ntBASIC2.61□□□□□ -1.99
SLC44A4Q53GD3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 RNU4-80P-201ENST00000363200 141 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 RNU6-923P-201ENST00000364753 107 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 SNORD31B-201ENST00000364977 69 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 MIR548B-201ENST00000385247 97 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 MIR1283-1-201ENST00000408494 87 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 AC016717.1-201ENST00000448918 286 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 AC008873.1-201ENST00000625051 138 ntBASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 RNU6-438P-201ENST00000365561 103 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 RNU6-187P-201ENST00000384139 106 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 SNORA80E-201ENST00000384744 137 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 AL357139.1-201ENST00000407792 426 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.650-201ENST00000459002 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 AC093259.1-201ENST00000509755 300 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 RNU6-155P-201ENST00000516347 100 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.777-201ENST00000516982 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 CYCSP23-201ENST00000519781 313 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 AC015712.3-201ENST00000559380 164 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.771-201ENST00000598668 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Z83818.1-201ENST00000603584 150 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.789-201ENST00000622480 102 ntBASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC44A4Q53GD3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC44A4Q53GD3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 RNU6-418P-201ENST00000384035 107 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 MIR586-201ENST00000385035 97 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
SLC44A4Q53GD3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.58□□□□□ -2
SLC44A4Q53GD3 RNA5SP475-201ENST00000410568 110 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 AC024067.1-201ENST00000426199 223 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 AL356320.1-201ENST00000429616 163 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
SLC44A4Q53GD3 AC016925.1-201ENST00000458303 298 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 COX6CP14-201ENST00000469580 174 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 RNU6-191P-201ENST00000516295 94 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.58□□□□□ -2
SLC44A4Q53GD3 MIR3133-201ENST00000583157 78 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.58□□□□□ -2
SLC44A4Q53GD3 MIR4753-201ENST00000585119 83 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 DEFB117-201ENST00000602356 141 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 AL137847.3-201ENST00000611521 109 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 U4atac.1-201ENST00000618345 95 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 U2.22-201ENST00000636441 106 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 MIR3674-201ENST00000636576 68 ntBASIC2.58□□□□□ -2
SLC44A4Q53GD3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SLC44A4Q53GD3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 AP006437.1-201ENST00000641440 3685 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 RNU6-1020P-201ENST00000363684 107 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 Y_RNA.464-201ENST00000384282 110 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 SNORD14D-201ENST00000384390 87 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.57□□□□□ -2
SLC44A4Q53GD3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.57□□□□□ -2
SLC44A4Q53GD3 DEFB122-202ENST00000569013 197 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms