Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC38Q502W7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CCDC38Q502W7 SNORD114-7-201ENST00000362520 77 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 SNORA27.1-201ENST00000362604 124 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 RN7SKP223-201ENST00000410582 62 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 AL139156.1-201ENST00000412785 841 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 MTND1P14-201ENST00000427400 950 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 U8.20-201ENST00000459445 131 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 snoU13.26-201ENST00000459452 105 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 RPL23AP42-201ENST00000471152 471 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 RPS26P45-201ENST00000471748 340 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC38Q502W7 AL163195.1-201ENST00000496941 348 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC38Q502W7 RNU1-41P-201ENST00000516161 162 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 RNU7-99P-201ENST00000516271 62 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 RNU1-48P-201ENST00000516400 162 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 RNA5SP481-201ENST00000516814 122 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 Y_RNA.711-201ENST00000516993 102 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 AC023157.2-201ENST00000540596 141 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 MIR3122-201ENST00000577243 73 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 MIR4648-201ENST00000580107 72 ntBASIC2.09□□□□□ -2.07
CCDC38Q502W7 MIR873-201ENST00000401120 77 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 AL079342.1-201ENST00000401460 267 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 RNU2-54P-201ENST00000410299 190 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 UBL5P3-201ENST00000475112 231 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 AL163540.1-201ENST00000485382 386 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 RNU7-128P-201ENST00000517247 62 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 RNA5SP437-201ENST00000517249 129 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC38Q502W7 AC020661.2-201ENST00000560114 134 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.08□□□□□ -2.08
CCDC38Q502W7 RNU6-661P-201ENST00000362409 107 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 Y_RNA.101-201ENST00000363154 102 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 RNU4-76P-201ENST00000364509 141 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 SNORA22B-201ENST00000383876 138 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 Y_RNA.439-201ENST00000384119 94 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 Y_RNA.462-201ENST00000384268 102 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 Y_RNA.471-201ENST00000384312 102 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CCDC38Q502W7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CCDC38Q502W7 MRPL42P3-201ENST00000401492 326 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC38Q502W7 AC010154.1-201ENST00000425857 269 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
CCDC38Q502W7 HSPE1P9-201ENST00000440046 311 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC38Q502W7 RNA5SP20-201ENST00000515976 84 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 AC022616.4-201ENST00000522985 181 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 MIR3171-201ENST00000584270 74 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 AC103810.8-201ENST00000607347 118 ntBASIC2.07□□□□□ -2.08
CCDC38Q502W7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC38Q502W7 RNU1-22P-201ENST00000363334 158 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 SNORD115-30-201ENST00000364117 82 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 RNU6-407P-201ENST00000365280 104 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 SNORA63.7-201ENST00000365579 123 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 AC117470.1-201ENST00000381974 330 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 RNU6-360P-201ENST00000390944 104 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 RNU11-5P-201ENST00000391216 129 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 Y_RNA.645-201ENST00000391229 102 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 RNU5A-5P-201ENST00000411054 116 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 AL390729.2-201ENST00000416137 156 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 AC005002.2-201ENST00000438228 269 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 RPEP5-201ENST00000441137 268 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 RPL36AP21-201ENST00000490372 323 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 AC097462.1-201ENST00000514125 324 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 Y_RNA.721-201ENST00000517207 102 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC38Q502W7 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 MIR4423-201ENST00000580922 80 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC38Q502W7 SNRPGP19-201ENST00000603826 189 ntBASIC2.06□□□□□ -2.08
CCDC38Q502W7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC38Q502W7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 Y_RNA.551-201ENST00000384661 102 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 Y_RNA.570-201ENST00000384750 101 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 MTCYBP6-201ENST00000441810 138 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 AC073910.1-201ENST00000445047 438 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 HMGB3P17-201ENST00000504195 649 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 RNU7-172P-201ENST00000517125 64 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 IGKV3-31-201ENST00000523109 329 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC38Q502W7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC38Q502W7 AC044792.1-201ENST00000593294 196 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 AC124312.5-201ENST00000604451 268 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 AC022441.3-201ENST00000605737 136 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 MIR7843-201ENST00000622274 79 ntBASIC2.05□□□□□ -2.08
CCDC38Q502W7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC38Q502W7 RNU6-1175P-201ENST00000365200 107 ntBASIC2.04□□□□□ -2.08
CCDC38Q502W7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC38Q502W7 FTH1P12-201ENST00000432137 551 ntBASIC2.04□□□□□ -2.08
CCDC38Q502W7 RNU7-94P-201ENST00000459576 63 ntBASIC2.04□□□□□ -2.08
CCDC38Q502W7 RPS26P55-201ENST00000471178 356 ntBASIC2.04□□□□□ -2.08
CCDC38Q502W7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms