Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 HIF1AP1-201ENST00000553642 175 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 AL355375.2-201ENST00000574825 175 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 MIR4263-201ENST00000584745 83 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 AC008608.1-201ENST00000603910 127 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 SNORD11B-201ENST00000607707 90 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 AC139792.3-201ENST00000623525 224 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 SNORD45.3-201ENST00000363836 72 ntBASIC-1.06□□□□□ -2.58
CCDC58Q4VC31 RNU6-116P-201ENST00000384042 109 ntBASIC-1.06□□□□□ -2.58
CCDC58Q4VC31 RNA5SP494-201ENST00000410653 129 ntBASIC-1.06□□□□□ -2.58
CCDC58Q4VC31 MTND1P26-201ENST00000440488 538 ntBASIC-1.06□□□□□ -2.58
CCDC58Q4VC31 AC116562.3-201ENST00000506136 177 ntBASIC-1.06□□□□□ -2.58
CCDC58Q4VC31 AC005178.1-201ENST00000508392 440 ntBASIC-1.06□□□□□ -2.58
CCDC58Q4VC31 SCARNA4-201ENST00000629045 128 ntBASIC-1.06□□□□□ -2.58
CCDC58Q4VC31 AC106754.1-201ENST00000562632 1513 ntBASIC-1.06□□□□□ -2.58
CCDC58Q4VC31 RNU6-179P-201ENST00000363350 107 ntBASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 MTCYBP36-201ENST00000404146 440 ntBASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 SNORD123-201ENST00000459473 70 ntBASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 AC091133.4-201ENST00000511142 308 ntBASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 SNORA14.1-201ENST00000516113 141 ntBASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 RNU2-60P-201ENST00000517290 128 ntBASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 AL590491.3-201ENST00000610731 82 ntBASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 FAM157A-202ENST00000615155 405 ntBASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.07□□□□□ -2.58
CCDC58Q4VC31 SNORD114-14-201ENST00000362723 75 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 RNU6-715P-201ENST00000365204 103 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 AC117470.1-201ENST00000381974 330 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 ERHP2-201ENST00000402323 299 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 MTCO2P29-201ENST00000465212 189 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 Y_RNA.673-201ENST00000516306 88 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 RNU6-323P-201ENST00000521915 107 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 AC068587.5-201ENST00000528506 175 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 MTND5P32-201ENST00000560711 1802 ntBASIC-1.08□□□□□ -2.58
CCDC58Q4VC31 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 MT-TQ-201ENST00000387372 72 ntBASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 SNORD65B-201ENST00000459126 73 ntBASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 AL358944.1-201ENST00000528537 144 ntBASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 MIR3152-201ENST00000579801 74 ntBASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 AC091304.9-201ENST00000612091 226 ntBASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 AC006386.1-201ENST00000619436 415 ntBASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.09□□□□□ -2.58
CCDC58Q4VC31 MTND4P9-201ENST00000507819 1346 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 MIR655-201ENST00000362159 97 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 RNU6-811P-201ENST00000384069 107 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 MIR563-201ENST00000385080 79 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 MTCO1P5-201ENST00000433573 344 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 AL353572.1-201ENST00000442490 417 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 RNU7-102P-201ENST00000458948 62 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 NAMPTP3-201ENST00000569273 224 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 AC006380.1-201ENST00000603598 186 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 RNU1-29P-201ENST00000606574 126 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 MIR6779-201ENST00000617283 64 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 MIR6514-201ENST00000622549 70 ntBASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-1.1□□□□□ -2.59
CCDC58Q4VC31 SNORA3B-201ENST00000391305 131 ntBASIC-1.11□□□□□ -2.59
CCDC58Q4VC31 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.11□□□□□ -2.59
CCDC58Q4VC31 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.11□□□□□ -2.59
CCDC58Q4VC31 MIR4636-201ENST00000582271 80 ntBASIC-1.11□□□□□ -2.59
CCDC58Q4VC31 AC087683.1-201ENST00000591187 441 ntBASIC-1.11□□□□□ -2.59
CCDC58Q4VC31 AP000753.3-201ENST00000604083 169 ntBASIC-1.11□□□□□ -2.59
CCDC58Q4VC31 AL442067.1-201ENST00000613261 223 ntBASIC-1.11□□□□□ -2.59
CCDC58Q4VC31 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-413P-201ENST00000384115 107 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-364P-201ENST00000384387 107 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 MIR501-201ENST00000390204 84 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-205P-201ENST00000390858 107 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-447P-201ENST00000410293 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-355P-201ENST00000410427 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-791P-201ENST00000410467 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-705P-201ENST00000410601 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-860P-201ENST00000410860 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU4-63P-201ENST00000411313 118 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 RNU6-785P-201ENST00000411324 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 MTCO2P6-201ENST00000463134 685 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 U6.90-201ENST00000614007 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 U6.70-201ENST00000620287 104 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 uc_338.22-201ENST00000622722 187 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 AC068880.4-201ENST00000623082 495 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 SNORD38B-202ENST00000625943 69 ntBASIC-1.12□□□□□ -2.59
CCDC58Q4VC31 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.13□□□□□ -2.59
CCDC58Q4VC31 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.13□□□□□ -2.59
CCDC58Q4VC31 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.13□□□□□ -2.59
CCDC58Q4VC31 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.13□□□□□ -2.59
CCDC58Q4VC31 MIR548L-201ENST00000408303 86 ntBASIC-1.13□□□□□ -2.59
CCDC58Q4VC31 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.13□□□□□ -2.59
CCDC58Q4VC31 MTCO1P20-201ENST00000425366 358 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms