Protein–RNA interactions for Protein: Q16385

SSX2, Protein SSX2, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2Q16385 Y_RNA.533-201ENST00000384596 114 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 Y_RNA.561-201ENST00000384694 100 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 MIR520E-201ENST00000384867 87 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 AC243428.1-201ENST00000421099 264 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.7□□□□□ -2.3
SSX2Q16385 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.7□□□□□ -2.3
SSX2Q16385 MTCO2P7-201ENST00000446518 666 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 SNORD111.1-201ENST00000516421 86 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 RNU6-405P-201ENST00000516637 110 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 RNU6-341P-201ENST00000516973 96 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 AP002004.2-201ENST00000531656 154 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
SSX2Q16385 MIR5696-201ENST00000578474 85 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 MIR3672-201ENST00000584290 82 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 AC091178.2-201ENST00000584401 117 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 PRELID3BP2-201ENST00000605362 201 ntBASIC0.7□□□□□ -2.3
SSX2Q16385 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
SSX2Q16385 AC027514.1-201ENST00000588561 1603 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 RNU6-483P-201ENST00000384088 108 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 MIR562-201ENST00000384894 95 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 RNA5SP482-201ENST00000391269 118 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 RNU2-66P-201ENST00000410650 161 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 AC018865.2-201ENST00000423631 129 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.69□□□□□ -2.3
SSX2Q16385 AC245047.8-201ENST00000456455 284 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 RNU7-66P-201ENST00000459469 62 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 HMGN2P26-201ENST00000463169 339 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 AL049830.1-201ENST00000468034 425 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.69□□□□□ -2.3
SSX2Q16385 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.69□□□□□ -2.3
SSX2Q16385 AC010486.3-201ENST00000511602 785 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 RNA5SP20-201ENST00000515976 84 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 RNU6-1116P-201ENST00000517269 99 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.69□□□□□ -2.3
SSX2Q16385 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.69□□□□□ -2.3
SSX2Q16385 AL162413.1-201ENST00000603198 110 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 AC004832.4-201ENST00000608952 331 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 AC092954.2-201ENST00000609103 430 ntBASIC0.69□□□□□ -2.3
SSX2Q16385 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SSX2Q16385 MIRLET7C-201ENST00000362160 84 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 MIR373-201ENST00000362273 69 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 RNU6-222P-201ENST00000362438 107 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 Y_RNA.212-201ENST00000364177 102 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 MIR526A1-201ENST00000384897 85 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 MTND3P23-201ENST00000431980 347 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 AC233266.1-201ENST00000454518 96 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 snoU13.25-201ENST00000458945 104 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 RPS29P1-201ENST00000465274 159 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.68□□□□□ -2.3
SSX2Q16385 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.68□□□□□ -2.3
SSX2Q16385 AC093023.1-201ENST00000547375 507 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 MIR4273-201ENST00000582824 84 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 AC242852.1-201ENST00000612151 96 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 Z99129.1-201ENST00000612510 255 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 AC244015.1-201ENST00000622301 99 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 CASC19-280ENST00000642102 1351 ntBASIC0.68□□□□□ -2.3
SSX2Q16385 Y_RNA.135-201ENST00000363439 95 ntBASIC0.67□□□□□ -2.3
SSX2Q16385 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.67□□□□□ -2.3
SSX2Q16385 Y_RNA.530-201ENST00000384587 101 ntBASIC0.67□□□□□ -2.3
SSX2Q16385 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.67□□□□□ -2.3
SSX2Q16385 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.67□□□□□ -2.3
SSX2Q16385 FAM71BP1-201ENST00000604431 523 ntBASIC0.67□□□□□ -2.3
SSX2Q16385 AC104465.1-201ENST00000611365 139 ntBASIC0.67□□□□□ -2.3
SSX2Q16385 AL391903.3-201ENST00000612158 163 ntBASIC0.67□□□□□ -2.3
SSX2Q16385 Y_RNA.256-201ENST00000364594 104 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 Y_RNA.330-201ENST00000365230 109 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 RNU6-281P-201ENST00000384212 103 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 ZNF885P-201ENST00000420174 1098 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 USP9YP16-201ENST00000430287 407 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 AL035398.1-201ENST00000430869 322 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.66□□□□□ -2.3
SSX2Q16385 USP9YP23-201ENST00000455085 407 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 AC019235.1-201ENST00000503847 207 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 AC046134.1-201ENST00000514454 666 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 RNU6-1114P-201ENST00000516022 107 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 MIR3192-201ENST00000584920 77 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.66□□□□□ -2.3
SSX2Q16385 AL078603.1-201ENST00000603824 313 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
SSX2Q16385 SNORA27.1-201ENST00000362604 124 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 RNU6-332P-201ENST00000391193 108 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 MTCYBP4-201ENST00000401524 249 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 RNU6-908P-201ENST00000410160 94 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.65□□□□□ -2.31
SSX2Q16385 USMG5P1-201ENST00000425964 177 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.65□□□□□ -2.31
SSX2Q16385 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.65□□□□□ -2.31
SSX2Q16385 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 AC073544.1-201ENST00000600110 1595 ntBASIC0.65□□□□□ -2.31
SSX2Q16385 RNU4-41P-201ENST00000364426 143 ntBASIC0.64□□□□□ -2.31
SSX2Q16385 SNORD116-11-201ENST00000383882 92 ntBASIC0.64□□□□□ -2.31
SSX2Q16385 Y_RNA.414-201ENST00000384011 101 ntBASIC0.64□□□□□ -2.31
SSX2Q16385 RNU6-136P-201ENST00000384663 107 ntBASIC0.64□□□□□ -2.31
SSX2Q16385 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
SSX2Q16385 MIR891A-201ENST00000401237 79 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms