Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-46P-201ENST00000383860 107 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 MTCO2P3-201ENST00000442543 421 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AC069113.1-201ENST00000517763 267 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AC100830.2-201ENST00000581636 240 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AC010525.2-201ENST00000590920 195 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AC087683.1-201ENST00000591187 441 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AC011921.3-201ENST00000605540 361 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AC013244.3-201ENST00000605614 388 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AL121992.2-201ENST00000606262 256 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 MIR7107-201ENST00000611489 80 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 FTX_2.1-201ENST00000618816 94 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AL589826.1-201ENST00000340697 249 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 RNU6-227P-201ENST00000362865 103 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 RNU6-809P-201ENST00000384461 107 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 SNORD116-12-201ENST00000384468 92 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 RNA5SP300-201ENST00000391197 107 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 AC010598.1-201ENST00000510378 103 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 MTND1P5-201ENST00000517906 940 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 MIR4493-201ENST00000584016 73 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 AC002044.1-201ENST00000606707 158 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 MIR3666-201ENST00000607845 111 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 AC137590.2-201ENST00000619709 240 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 U6.114-201ENST00000636407 96 ntBASIC-0.77□□□□□ -2.53
HIST1H1AQ02539 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 SNORA26-201ENST00000391286 122 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 MTND1P8-201ENST00000571424 950 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 BNIP3P39-201ENST00000601077 554 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 AL359999.1-201ENST00000604513 294 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 AC010608.3-201ENST00000625048 527 ntBASIC-0.78□□□□□ -2.53
HIST1H1AQ02539 RNU6-161P-201ENST00000363051 106 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 RNU6-434P-201ENST00000384376 107 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 RNU6-205P-201ENST00000390858 107 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 MRPL42P2-201ENST00000403169 426 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 RNA5SP163-201ENST00000410304 99 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 MIR1912-201ENST00000410389 80 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 RNA5SP451-201ENST00000410588 110 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 RPL39P34-201ENST00000477141 156 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 SNORA14.1-201ENST00000516113 141 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 RNU6-612P-201ENST00000516909 102 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 AC246785.4-201ENST00000605374 287 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 AC126544.2-201ENST00000625174 749 ntBASIC-0.79□□□□□ -2.54
HIST1H1AQ02539 RNU6-266P-201ENST00000364225 107 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-393P-201ENST00000384475 107 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-376P-201ENST00000384731 106 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-447P-201ENST00000410293 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-355P-201ENST00000410427 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-791P-201ENST00000410467 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-705P-201ENST00000410601 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-860P-201ENST00000410860 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-785P-201ENST00000411324 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 Z99497.1-201ENST00000421282 135 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU7-102P-201ENST00000458948 62 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 MIR4636-201ENST00000582271 80 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 MIR3941-201ENST00000582572 103 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 AC091304.9-201ENST00000612091 226 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 U6.90-201ENST00000614007 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 RNU6-489P-201ENST00000618289 107 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 U6.70-201ENST00000620287 104 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 AC091948.2-201ENST00000636510 279 ntBASIC-0.8□□□□□ -2.54
HIST1H1AQ02539 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 SNORD68-201ENST00000363214 84 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 RNU6-652P-201ENST00000365488 107 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 SNORD116.1-201ENST00000365628 92 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 RNU2-54P-201ENST00000410299 190 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 AL353572.1-201ENST00000442490 417 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 MTND4P19-201ENST00000446659 478 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 RPL39P5-202ENST00000512505 151 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 RNA5SP54-201ENST00000516951 92 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 AP003181.2-201ENST00000528941 181 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 AP000753.3-201ENST00000604083 169 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 RMST_3.1-201ENST00000611651 109 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 AL139418.1-201ENST00000613613 177 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 Pinc.1-201ENST00000616452 154 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 SNORD38B-202ENST00000625943 69 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 AC068137.4-201ENST00000638485 296 ntBASIC-0.81□□□□□ -2.54
HIST1H1AQ02539 RNA5SP98-201ENST00000363158 137 ntBASIC-0.82□□□□□ -2.54
HIST1H1AQ02539 U8.5-201ENST00000364528 136 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms