Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC016597.2-201ENST00000613256 341 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU6-47P-201ENST00000383866 107 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 MIR19A-201ENST00000384878 82 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 SNORD83B-201ENST00000386745 93 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 MT-TN-201ENST00000387400 73 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.34□□□□□ -2.46
HSPG2P98160 AC133104.1-201ENST00000429100 218 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.34□□□□□ -2.46
HSPG2P98160 MTND1P31-201ENST00000449206 961 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 RPS29P27-201ENST00000463711 170 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.34□□□□□ -2.46
HSPG2P98160 ZNF321P-202ENST00000550843 495 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 MIR4676-201ENST00000583078 72 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC069545.1-201ENST00000605671 358 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC120349.2-201ENST00000625002 298 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
HSPG2P98160 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 RNU6-137P-201ENST00000363680 108 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 MIR563-201ENST00000385080 79 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.34□□□□□ -2.46
HSPG2P98160 RPS24P1-201ENST00000438550 371 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 MIR378D2-201ENST00000580636 98 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC008521.1-201ENST00000587471 187 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 VN1R87P-201ENST00000596706 487 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC026585.1-201ENST00000619582 524 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC231657.1-201ENST00000624313 397 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC099654.8-201ENST00000637757 681 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC106754.1-201ENST00000562632 1513 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
HSPG2P98160 SNORA1B-201ENST00000362535 133 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 SNORA3B-201ENST00000391305 131 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 MCFD2P1-201ENST00000417812 300 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC006210.1-201ENST00000424882 111 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.34□□□□□ -2.46
HSPG2P98160 AC010486.2-201ENST00000505572 483 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 RNA5SP66-201ENST00000517178 101 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC012467.1-201ENST00000607740 256 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 MIR586-201ENST00000385035 97 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 RNU2-42P-201ENST00000410697 113 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AC012306.1-201ENST00000423267 114 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.34□□□□□ -2.46
HSPG2P98160 MTND2P6-201ENST00000455337 1030 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 USP9YP25-201ENST00000457708 443 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 RNU7-102P-201ENST00000458948 62 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.34□□□□□ -2.46
HSPG2P98160 RNU6-881P-201ENST00000516813 102 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 MIR5706-201ENST00000579841 80 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 AL139022.2-201ENST00000606934 443 ntBASIC-0.34□□□□□ -2.46
HSPG2P98160 RNU6-552P-201ENST00000362869 119 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 RNU4-36P-201ENST00000364294 144 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 RNU6-364P-201ENST00000384387 107 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 MTND3P20-201ENST00000407663 186 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 AC092447.3-201ENST00000426027 686 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 MTND1P32-201ENST00000433043 938 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 MIR18B-201ENST00000454574 71 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.35□□□□□ -2.46
HSPG2P98160 AC091951.3-201ENST00000504093 246 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 AC046134.1-201ENST00000514454 666 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.35□□□□□ -2.46
HSPG2P98160 AC091178.2-201ENST00000584401 117 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 SNORD92-201ENST00000585078 85 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 AC234772.3-201ENST00000602277 528 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 SNORD11B-201ENST00000607707 90 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 AC012409.4-201ENST00000612923 249 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 AC138649.3-201ENST00000622154 254 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 AC112204.3-201ENST00000623822 332 ntBASIC-0.35□□□□□ -2.46
HSPG2P98160 MIR655-201ENST00000362159 97 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 MIR101-2-201ENST00000362195 79 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 RNY4P28-201ENST00000365281 93 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 MIR136-201ENST00000385207 82 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 CR383656.4-201ENST00000546909 122 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 DPPA3P3-201ENST00000603842 430 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 AC068792.1-201ENST00000621354 417 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 SNORA26.5-201ENST00000391215 123 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 AL512326.2-201ENST00000426359 151 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 SNAP23P1-201ENST00000433229 246 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 RNU6-221P-201ENST00000459541 99 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 RNU7-99P-201ENST00000516271 62 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 RNU2-10P-201ENST00000516375 211 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.35□□□□□ -2.47
HSPG2P98160 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.35□□□□□ -2.47
HSPG2P98160 MTATP6P2-201ENST00000603319 678 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 AC006380.1-201ENST00000603598 186 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 AL139286.2-201ENST00000606838 396 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 AC022893.3-201ENST00000607665 437 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 AC134878.1-201ENST00000619901 243 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 RMST_7.1-201ENST00000621935 268 ntBASIC-0.35□□□□□ -2.47
HSPG2P98160 MIRLET7C-201ENST00000362160 84 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU6-527P-201ENST00000363425 104 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms