Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC107401.1-201ENST00000503426 685 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 AC104576.1-201ENST00000524225 88 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 MIR5583-1-201ENST00000580941 59 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 AC087683.2-201ENST00000611384 326 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 AC067863.3-201ENST00000624172 122 ntBASIC-0.19□□□□□ -2.44
H3F3AP84243 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 RNU6-613P-201ENST00000410412 108 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 AL139396.1-201ENST00000421137 167 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 MRPS10P2-201ENST00000431226 381 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.2□□□□□ -2.44
H3F3AP84243 SEPT7P4-201ENST00000437076 306 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 AC114811.1-201ENST00000507207 168 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 RNU6-977P-201ENST00000516411 103 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 SNORA18.7-201ENST00000516910 131 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 AC012433.1-201ENST00000588916 398 ntBASIC-0.2□□□□□ -2.44
H3F3AP84243 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 SNORD118-201ENST00000363593 134 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 MIR521-1-201ENST00000384902 87 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 MIR122-201ENST00000385044 85 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 AC243428.1-201ENST00000421099 264 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 AC015818.7-201ENST00000428754 109 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 AC087499.7-201ENST00000441958 109 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 RPS3AP17-201ENST00000472594 777 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.21□□□□□ -2.44
H3F3AP84243 RNU7-43P-201ENST00000516554 64 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 AC112693.2-201ENST00000556538 232 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 AL109933.3-201ENST00000619095 188 ntBASIC-0.21□□□□□ -2.44
H3F3AP84243 RNU6-456P-201ENST00000384493 107 ntBASIC-0.22□□□□□ -2.44
H3F3AP84243 MIR136-201ENST00000385207 82 ntBASIC-0.22□□□□□ -2.44
H3F3AP84243 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.22□□□□□ -2.44
H3F3AP84243 AL049545.1-201ENST00000401856 572 ntBASIC-0.22□□□□□ -2.44
H3F3AP84243 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.22□□□□□ -2.44
H3F3AP84243 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
H3F3AP84243 SCOCP1-201ENST00000554676 349 ntBASIC-0.22□□□□□ -2.44
H3F3AP84243 uc_338.16-201ENST00000621804 95 ntBASIC-0.22□□□□□ -2.44
H3F3AP84243 MTND4P12-201ENST00000498999 1377 ntBASIC-0.22□□□□□ -2.45
H3F3AP84243 SNORD68-201ENST00000363214 84 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 RNU6-873P-201ENST00000363833 107 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 SNORD115-8-201ENST00000363856 82 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 SNORD115-38-201ENST00000365037 82 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 RNU6-407P-201ENST00000365280 104 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.23□□□□□ -2.45
H3F3AP84243 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.23□□□□□ -2.45
H3F3AP84243 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.23□□□□□ -2.45
H3F3AP84243 AC091885.1-201ENST00000506658 268 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 RNA5SP94-201ENST00000516917 108 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.23□□□□□ -2.45
H3F3AP84243 ELOCP32-201ENST00000548625 324 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 MIR548AB-201ENST00000584917 84 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 AC107308.1-201ENST00000615897 301 ntBASIC-0.23□□□□□ -2.45
H3F3AP84243 MIR15B-201ENST00000385045 98 ntBASIC-0.24□□□□□ -2.45
H3F3AP84243 RNA5SP127-201ENST00000411051 133 ntBASIC-0.24□□□□□ -2.45
H3F3AP84243 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.24□□□□□ -2.45
H3F3AP84243 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.24□□□□□ -2.45
H3F3AP84243 MTND1P4-201ENST00000435196 415 ntBASIC-0.24□□□□□ -2.45
H3F3AP84243 snoU13.21-201ENST00000459368 105 ntBASIC-0.24□□□□□ -2.45
H3F3AP84243 AC091179.3-201ENST00000474761 144 ntBASIC-0.24□□□□□ -2.45
H3F3AP84243 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.24□□□□□ -2.45
H3F3AP84243 TUSC7.1-201ENST00000610969 165 ntBASIC-0.24□□□□□ -2.45
H3F3AP84243 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.25□□□□□ -2.45
H3F3AP84243 SNORA20B-201ENST00000384220 132 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 RNU6-784P-201ENST00000384330 106 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 RNU6-903P-201ENST00000391270 109 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 RNU2-9P-201ENST00000410194 145 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 AC018865.2-201ENST00000423631 129 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.25□□□□□ -2.45
H3F3AP84243 AC009961.2-201ENST00000435771 251 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 RNA5SP20-201ENST00000515976 84 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 SNORA14.1-201ENST00000516113 141 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 MIR2115-201ENST00000516657 100 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 AP002963.1-201ENST00000530590 184 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.25□□□□□ -2.45
H3F3AP84243 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.25□□□□□ -2.45
H3F3AP84243 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.25□□□□□ -2.45
H3F3AP84243 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.25□□□□□ -2.45
H3F3AP84243 MIR8076-201ENST00000611401 83 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 MIR4251-201ENST00000635819 61 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 AC068137.4-201ENST00000638485 296 ntBASIC-0.25□□□□□ -2.45
H3F3AP84243 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 SNORA8.2-201ENST00000384372 139 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 MIR593-201ENST00000384856 100 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 SNORA75.6-201ENST00000391318 127 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 AC018710.1-201ENST00000506509 158 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 RNU6-107P-201ENST00000516643 102 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 AC091144.1-201ENST00000519573 138 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 AL358944.1-201ENST00000528537 144 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 AC087683.1-201ENST00000591187 441 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 AL022161.1-201ENST00000604390 213 ntBASIC-0.26□□□□□ -2.45
H3F3AP84243 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.26□□□□□ -2.45
H3F3AP84243 SNORD113-6-201ENST00000363345 75 ntBASIC-0.27□□□□□ -2.45
H3F3AP84243 U8.7-201ENST00000364940 136 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms