Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC046134.1-201ENST00000514454 666 ntBASIC0.99□□□□□ -2.25
IRX3P78415 RNU6-1114P-201ENST00000516022 107 ntBASIC0.99□□□□□ -2.25
IRX3P78415 Y_RNA.683-201ENST00000516508 93 ntBASIC0.99□□□□□ -2.25
IRX3P78415 Y_RNA.706-201ENST00000516933 99 ntBASIC0.99□□□□□ -2.25
IRX3P78415 AC090617.3-201ENST00000573670 475 ntBASIC0.99□□□□□ -2.25
IRX3P78415 AL929325.1-201ENST00000603096 117 ntBASIC0.99□□□□□ -2.25
IRX3P78415 AC013244.2-201ENST00000603396 103 ntBASIC0.99□□□□□ -2.25
IRX3P78415 AC080013.6-201ENST00000606185 215 ntBASIC0.99□□□□□ -2.25
IRX3P78415 AC021506.2-201ENST00000612354 169 ntBASIC0.99□□□□□ -2.25
IRX3P78415 SNORA33-201ENST00000363664 130 ntBASIC0.98□□□□□ -2.25
IRX3P78415 RNU6-593P-201ENST00000364716 112 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.98□□□□□ -2.25
IRX3P78415 AC004941.2-201ENST00000427009 228 ntBASIC0.98□□□□□ -2.25
IRX3P78415 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.98□□□□□ -2.25
IRX3P78415 UBE2V1P7-201ENST00000446395 340 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.98□□□□□ -2.25
IRX3P78415 SNORD5.1-201ENST00000458800 75 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AC091179.3-201ENST00000474761 144 ntBASIC0.98□□□□□ -2.25
IRX3P78415 RN7SKP88-201ENST00000516847 250 ntBASIC0.98□□□□□ -2.25
IRX3P78415 RNU6-1314P-201ENST00000517139 104 ntBASIC0.98□□□□□ -2.25
IRX3P78415 RNA5SP454-201ENST00000517231 127 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.98□□□□□ -2.25
IRX3P78415 CYP3A52P-201ENST00000563326 91 ntBASIC0.98□□□□□ -2.25
IRX3P78415 MIR4714-201ENST00000580728 77 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AC022217.4-201ENST00000604389 163 ntBASIC0.98□□□□□ -2.25
IRX3P78415 FAM71BP1-201ENST00000604431 523 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AL365434.2-201ENST00000607979 234 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AL021879.1-201ENST00000611756 288 ntBASIC0.98□□□□□ -2.25
IRX3P78415 7SK.8-201ENST00000612110 250 ntBASIC0.98□□□□□ -2.25
IRX3P78415 7SK.11-201ENST00000615477 250 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AC073349.3-201ENST00000617616 186 ntBASIC0.98□□□□□ -2.25
IRX3P78415 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.98□□□□□ -2.25
IRX3P78415 7SK.13-201ENST00000622040 250 ntBASIC0.98□□□□□ -2.25
IRX3P78415 RNA5SP325-201ENST00000363756 130 ntBASIC0.97□□□□□ -2.25
IRX3P78415 Y_RNA.450-201ENST00000384198 113 ntBASIC0.97□□□□□ -2.25
IRX3P78415 MIR10B-201ENST00000385011 110 ntBASIC0.97□□□□□ -2.25
IRX3P78415 MIR216A-201ENST00000385063 110 ntBASIC0.97□□□□□ -2.25
IRX3P78415 RNU6-1186P-201ENST00000410429 97 ntBASIC0.97□□□□□ -2.25
IRX3P78415 DLGAP5P1-201ENST00000430307 464 ntBASIC0.97□□□□□ -2.25
IRX3P78415 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.97□□□□□ -2.25
IRX3P78415 RNU6-720P-201ENST00000516363 108 ntBASIC0.97□□□□□ -2.25
IRX3P78415 RNU6-566P-201ENST00000516790 107 ntBASIC0.97□□□□□ -2.25
IRX3P78415 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.97□□□□□ -2.25
IRX3P78415 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.97□□□□□ -2.25
IRX3P78415 RPL21P9-201ENST00000556149 474 ntBASIC0.97□□□□□ -2.25
IRX3P78415 RN7SL793P-201ENST00000583259 296 ntBASIC0.97□□□□□ -2.25
IRX3P78415 AL390123.1-201ENST00000603216 237 ntBASIC0.97□□□□□ -2.25
IRX3P78415 Y_RNA.89-201ENST00000363031 102 ntBASIC0.96□□□□□ -2.26
IRX3P78415 Y_RNA.205-201ENST00000364128 113 ntBASIC0.96□□□□□ -2.26
IRX3P78415 SNORD87-201ENST00000364849 89 ntBASIC0.96□□□□□ -2.26
IRX3P78415 Y_RNA.415-201ENST00000384012 112 ntBASIC0.96□□□□□ -2.26
IRX3P78415 RNU6-281P-201ENST00000384212 103 ntBASIC0.96□□□□□ -2.26
IRX3P78415 MIR487A-201ENST00000385009 80 ntBASIC0.96□□□□□ -2.26
IRX3P78415 RNU6-510P-201ENST00000391239 108 ntBASIC0.96□□□□□ -2.26
IRX3P78415 RNU2-64P-201ENST00000411315 191 ntBASIC0.96□□□□□ -2.26
IRX3P78415 MRPS10P1-201ENST00000448483 130 ntBASIC0.96□□□□□ -2.26
IRX3P78415 MTND1P17-201ENST00000448961 204 ntBASIC0.96□□□□□ -2.26
IRX3P78415 SNORD65B-201ENST00000459126 73 ntBASIC0.96□□□□□ -2.26
IRX3P78415 AC074133.1-201ENST00000515696 183 ntBASIC0.96□□□□□ -2.26
IRX3P78415 SNORA31.10-201ENST00000516482 106 ntBASIC0.96□□□□□ -2.26
IRX3P78415 RNU7-128P-201ENST00000517247 62 ntBASIC0.96□□□□□ -2.26
IRX3P78415 TPRKBP2-201ENST00000565969 475 ntBASIC0.96□□□□□ -2.26
IRX3P78415 AF250324.2-201ENST00000608299 610 ntBASIC0.96□□□□□ -2.26
IRX3P78415 AC093913.1-201ENST00000614178 329 ntBASIC0.96□□□□□ -2.26
IRX3P78415 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
IRX3P78415 SNORD114-7-201ENST00000362520 77 ntBASIC0.95□□□□□ -2.26
IRX3P78415 RNU6-1264P-201ENST00000383891 107 ntBASIC0.95□□□□□ -2.26
IRX3P78415 Y_RNA.405-201ENST00000383979 100 ntBASIC0.95□□□□□ -2.26
IRX3P78415 Y_RNA.451-201ENST00000384200 100 ntBASIC0.95□□□□□ -2.26
IRX3P78415 Y_RNA.524-201ENST00000384564 100 ntBASIC0.95□□□□□ -2.26
IRX3P78415 RNY1P4-201ENST00000384595 115 ntBASIC0.95□□□□□ -2.26
IRX3P78415 Y_RNA.561-201ENST00000384694 100 ntBASIC0.95□□□□□ -2.26
IRX3P78415 RPL30P16-201ENST00000419341 429 ntBASIC0.95□□□□□ -2.26
IRX3P78415 USP9YP16-201ENST00000430287 407 ntBASIC0.95□□□□□ -2.26
IRX3P78415 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.95□□□□□ -2.26
IRX3P78415 MTND1P34-201ENST00000438556 671 ntBASIC0.95□□□□□ -2.26
IRX3P78415 USP9YP23-201ENST00000455085 407 ntBASIC0.95□□□□□ -2.26
IRX3P78415 AP000870.1-201ENST00000472927 406 ntBASIC0.95□□□□□ -2.26
IRX3P78415 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.95□□□□□ -2.26
IRX3P78415 SCARNA16.2-201ENST00000516520 172 ntBASIC0.95□□□□□ -2.26
IRX3P78415 AK6P2-201ENST00000549020 471 ntBASIC0.95□□□□□ -2.26
IRX3P78415 MIR4438-201ENST00000585271 93 ntBASIC0.95□□□□□ -2.26
IRX3P78415 AC090617.10-201ENST00000624308 134 ntBASIC0.95□□□□□ -2.26
IRX3P78415 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.95□□□□□ -2.26
IRX3P78415 MIR3662-201ENST00000637030 95 ntBASIC0.95□□□□□ -2.26
IRX3P78415 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.95□□□□□ -2.26
IRX3P78415 Y_RNA.41-201ENST00000362646 102 ntBASIC0.94□□□□□ -2.26
IRX3P78415 MIR660-201ENST00000385235 97 ntBASIC0.94□□□□□ -2.26
IRX3P78415 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
IRX3P78415 AL356776.1-201ENST00000406574 447 ntBASIC0.94□□□□□ -2.26
IRX3P78415 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.94□□□□□ -2.26
IRX3P78415 SUMO2P16-201ENST00000519475 264 ntBASIC0.94□□□□□ -2.26
IRX3P78415 DEFB108E-201ENST00000524692 240 ntBASIC0.94□□□□□ -2.26
IRX3P78415 AC133485.1-201ENST00000567176 124 ntBASIC0.94□□□□□ -2.26
IRX3P78415 AC138907.6-201ENST00000568401 126 ntBASIC0.94□□□□□ -2.26
IRX3P78415 MIR3942-201ENST00000585264 109 ntBASIC0.94□□□□□ -2.26
IRX3P78415 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.94□□□□□ -2.26
IRX3P78415 MIR410-201ENST00000362222 80 ntBASIC0.93□□□□□ -2.26
IRX3P78415 RNU6-1090P-201ENST00000364065 94 ntBASIC0.93□□□□□ -2.26
IRX3P78415 RNU4-76P-201ENST00000364509 141 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms