Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC063976.4-201ENST00000421971 163 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 SNORA31.2-201ENST00000516019 134 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 MIR5695-201ENST00000579717 85 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 AC022432.1-201ENST00000595739 310 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 AC012557.2-201ENST00000605919 418 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 MIR8054-201ENST00000620877 86 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 MIR6835-201ENST00000621552 64 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
CCNA1P78396 RNU6-222P-201ENST00000362438 107 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 RNU6-1059P-201ENST00000363752 98 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 RNA5SP325-201ENST00000363756 130 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 RNU6-793P-201ENST00000384233 104 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 SNORA12.1-201ENST00000390873 148 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 RNU6-159P-201ENST00000391080 106 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 AC093534.1-201ENST00000504977 132 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 RNU6-1198P-201ENST00000516904 67 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 AC027419.1-201ENST00000522976 328 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 AL162424.1-201ENST00000602325 221 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 AL390123.1-201ENST00000603216 237 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 AL513423.1-201ENST00000621695 132 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 AC100810.6-201ENST00000638068 285 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 MIR6866-201ENST00000638146 69 ntBASIC0.9□□□□□ -2.27
CCNA1P78396 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCNA1P78396 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CCNA1P78396 Y_RNA.402-201ENST00000383972 102 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 Y_RNA.436-201ENST00000384097 102 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 MIR10B-201ENST00000385011 110 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 RNU6-910P-201ENST00000390844 107 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 AL034345.1-201ENST00000407768 123 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 RNU6-1148P-201ENST00000410992 104 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 RNU6-1054P-201ENST00000411293 104 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 AC016907.1-201ENST00000419483 435 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.89□□□□□ -2.27
CCNA1P78396 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 RNU6-1314P-201ENST00000517139 104 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 AC134698.4-201ENST00000523451 826 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 MIR5696-201ENST00000578474 85 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 AC068790.6-201ENST00000602558 258 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 GHRLOS.1-201ENST00000610995 70 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 AC015540.1-201ENST00000615828 501 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
CCNA1P78396 Y_RNA.179-201ENST00000363844 90 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 RNU6-280P-201ENST00000364145 104 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 Y_RNA.405-201ENST00000383979 100 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 Y_RNA.451-201ENST00000384200 100 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 Y_RNA.524-201ENST00000384564 100 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 Y_RNA.554-201ENST00000384672 102 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 Y_RNA.561-201ENST00000384694 100 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 RNU6-440P-201ENST00000390882 105 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 MRPL42P3-201ENST00000401492 326 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 MTND3P23-201ENST00000431980 347 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 MTND3P21-201ENST00000433774 331 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 MTND4P18-201ENST00000447010 465 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 NDUFB4P10-201ENST00000452541 359 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 AC093303.1-201ENST00000514549 295 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 RNU6-864P-201ENST00000516256 108 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 RNU6-107P-201ENST00000516643 102 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 RNU6-1088P-201ENST00000516850 104 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 AC091144.1-201ENST00000519573 138 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 APOOP3-201ENST00000536787 586 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 AC023157.2-201ENST00000540596 141 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 MIR4438-201ENST00000585271 93 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 7SK.7-201ENST00000603504 247 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 U6.73-201ENST00000619194 103 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 AC106754.2-201ENST00000623006 233 ntBASIC0.88□□□□□ -2.27
CCNA1P78396 Y_RNA.184-201ENST00000363884 108 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 RNU6-505P-201ENST00000384427 107 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 MIR181A1-201ENST00000385026 110 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 RNU6-373P-201ENST00000411247 98 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 STAG3L5P-204ENST00000443759 179 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 MRPS10P1-201ENST00000448483 130 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 PDCD5P2-201ENST00000507570 312 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 RNU6-922P-201ENST00000516753 99 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 DEFB108E-201ENST00000524692 240 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 AL590705.4-201ENST00000532209 134 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.87□□□□□ -2.27
CCNA1P78396 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.87□□□□□ -2.27
CCNA1P78396 MIR4273-201ENST00000582824 84 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 AC080013.6-201ENST00000606185 215 ntBASIC0.87□□□□□ -2.27
CCNA1P78396 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CCNA1P78396 Y_RNA.9-201ENST00000362354 101 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 Y_RNA.48-201ENST00000362710 103 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 RNU6-137P-201ENST00000363680 108 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 RNU4-12P-201ENST00000365233 139 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.86□□□□□ -2.27
CCNA1P78396 AC009161.1-201ENST00000417306 376 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 USP9YP30-201ENST00000430729 455 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.86□□□□□ -2.27
CCNA1P78396 MTATP6P26-201ENST00000445926 662 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 RPS27P22-201ENST00000478056 241 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 AC105758.1-201ENST00000506038 399 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 RNU7-175P-201ENST00000515915 61 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 RNU7-99P-201ENST00000516271 62 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 AC004584.2-201ENST00000570407 410 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 MIR4778-201ENST00000577635 80 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 AL590095.2-201ENST00000604136 117 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms