Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.22□□□□□ -2.44
HIST1H3AP68431 AL049545.1-201ENST00000401856 572 ntBASIC-0.22□□□□□ -2.44
HIST1H3AP68431 MIR1197-201ENST00000408818 88 ntBASIC-0.22□□□□□ -2.44
HIST1H3AP68431 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.22□□□□□ -2.44
HIST1H3AP68431 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.22□□□□□ -2.44
HIST1H3AP68431 SEPT7P4-201ENST00000437076 306 ntBASIC-0.22□□□□□ -2.44
HIST1H3AP68431 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.22□□□□□ -2.44
HIST1H3AP68431 SCOCP1-201ENST00000554676 349 ntBASIC-0.22□□□□□ -2.44
HIST1H3AP68431 RBM11P1-201ENST00000604951 799 ntBASIC-0.22□□□□□ -2.44
HIST1H3AP68431 uc_338.16-201ENST00000621804 95 ntBASIC-0.22□□□□□ -2.44
HIST1H3AP68431 MTND4P12-201ENST00000498999 1377 ntBASIC-0.22□□□□□ -2.45
HIST1H3AP68431 SNORD68-201ENST00000363214 84 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 RNU6-873P-201ENST00000363833 107 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 SNORD115-8-201ENST00000363856 82 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 SNORD115-38-201ENST00000365037 82 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 RNU6-407P-201ENST00000365280 104 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 MIR1302-7-201ENST00000408841 72 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 RNU6-613P-201ENST00000410412 108 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.23□□□□□ -2.45
HIST1H3AP68431 MRPS10P2-201ENST00000431226 381 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.23□□□□□ -2.45
HIST1H3AP68431 AC091885.1-201ENST00000506658 268 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.23□□□□□ -2.45
HIST1H3AP68431 ELOCP32-201ENST00000548625 324 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 MIR548AB-201ENST00000584917 84 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 AC107308.1-201ENST00000615897 301 ntBASIC-0.23□□□□□ -2.45
HIST1H3AP68431 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.24□□□□□ -2.45
HIST1H3AP68431 MIR15B-201ENST00000385045 98 ntBASIC-0.24□□□□□ -2.45
HIST1H3AP68431 MIR613-201ENST00000385248 95 ntBASIC-0.24□□□□□ -2.45
HIST1H3AP68431 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.24□□□□□ -2.45
HIST1H3AP68431 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.24□□□□□ -2.45
HIST1H3AP68431 MTND1P4-201ENST00000435196 415 ntBASIC-0.24□□□□□ -2.45
HIST1H3AP68431 AC091179.3-201ENST00000474761 144 ntBASIC-0.24□□□□□ -2.45
HIST1H3AP68431 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.24□□□□□ -2.45
HIST1H3AP68431 TUSC7.1-201ENST00000610969 165 ntBASIC-0.24□□□□□ -2.45
HIST1H3AP68431 AC121333.1-201ENST00000567488 2709 ntBASIC-0.24□□□□□ -2.45
HIST1H3AP68431 SNORD118-201ENST00000363593 134 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.25□□□□□ -2.45
HIST1H3AP68431 SNORA20B-201ENST00000384220 132 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 RNU6-784P-201ENST00000384330 106 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 RNU6-903P-201ENST00000391270 109 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 RNU2-9P-201ENST00000410194 145 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 AC018865.2-201ENST00000423631 129 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.25□□□□□ -2.45
HIST1H3AP68431 AC009961.2-201ENST00000435771 251 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 RNA5SP20-201ENST00000515976 84 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 SNORA14.1-201ENST00000516113 141 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 MIR2115-201ENST00000516657 100 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 RNA5SP94-201ENST00000516917 108 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 RNA5SP330-201ENST00000517096 96 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 AP002963.1-201ENST00000530590 184 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.25□□□□□ -2.45
HIST1H3AP68431 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.25□□□□□ -2.45
HIST1H3AP68431 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.25□□□□□ -2.45
HIST1H3AP68431 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.25□□□□□ -2.45
HIST1H3AP68431 MIR8076-201ENST00000611401 83 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 MIR2909-201ENST00000617113 69 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 MIR4251-201ENST00000635819 61 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 AC068137.4-201ENST00000638485 296 ntBASIC-0.25□□□□□ -2.45
HIST1H3AP68431 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.26□□□□□ -2.45
HIST1H3AP68431 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.26□□□□□ -2.45
HIST1H3AP68431 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.26□□□□□ -2.45
HIST1H3AP68431 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.26□□□□□ -2.45
HIST1H3AP68431 AC018710.1-201ENST00000506509 158 ntBASIC-0.26□□□□□ -2.45
HIST1H3AP68431 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.26□□□□□ -2.45
HIST1H3AP68431 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.26□□□□□ -2.45
HIST1H3AP68431 RNU6-107P-201ENST00000516643 102 ntBASIC-0.26□□□□□ -2.45
HIST1H3AP68431 AC091144.1-201ENST00000519573 138 ntBASIC-0.26□□□□□ -2.45
HIST1H3AP68431 AL358944.1-201ENST00000528537 144 ntBASIC-0.26□□□□□ -2.45
HIST1H3AP68431 AL022161.1-201ENST00000604390 213 ntBASIC-0.26□□□□□ -2.45
HIST1H3AP68431 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.26□□□□□ -2.45
HIST1H3AP68431 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.27□□□□□ -2.45
HIST1H3AP68431 SNORD113-6-201ENST00000363345 75 ntBASIC-0.27□□□□□ -2.45
HIST1H3AP68431 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.27□□□□□ -2.45
HIST1H3AP68431 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.27□□□□□ -2.45
HIST1H3AP68431 RNU6-325P-201ENST00000411132 105 ntBASIC-0.27□□□□□ -2.45
HIST1H3AP68431 AL590632.1-201ENST00000424289 371 ntBASIC-0.27□□□□□ -2.45
HIST1H3AP68431 AL009048.1-201ENST00000450437 298 ntBASIC-0.27□□□□□ -2.45
HIST1H3AP68431 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.27□□□□□ -2.45
HIST1H3AP68431 SNORA32.1-201ENST00000364514 115 ntBASIC-0.28□□□□□ -2.45
HIST1H3AP68431 SNORA8.2-201ENST00000384372 139 ntBASIC-0.28□□□□□ -2.45
HIST1H3AP68431 RNA5SP496-201ENST00000391240 109 ntBASIC-0.28□□□□□ -2.45
HIST1H3AP68431 SNORA75.6-201ENST00000391318 127 ntBASIC-0.28□□□□□ -2.45
HIST1H3AP68431 AC015818.7-201ENST00000428754 109 ntBASIC-0.28□□□□□ -2.45
HIST1H3AP68431 AC087499.7-201ENST00000441958 109 ntBASIC-0.28□□□□□ -2.45
HIST1H3AP68431 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.28□□□□□ -2.45
HIST1H3AP68431 snoU13.21-201ENST00000459368 105 ntBASIC-0.28□□□□□ -2.45
HIST1H3AP68431 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.28□□□□□ -2.45
HIST1H3AP68431 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.28□□□□□ -2.45
HIST1H3AP68431 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.28□□□□□ -2.45
HIST1H3AP68431 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.28□□□□□ -2.45
HIST1H3AP68431 U8.7-201ENST00000364940 136 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 RNU6-934P-201ENST00000365154 107 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 RNU6-282P-201ENST00000365357 103 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 RNU6-933P-201ENST00000384424 107 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
HIST1H3AP68431 AL390729.2-201ENST00000416137 156 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms