Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MIR8076-201ENST00000611401 83 ntBASIC-0.26□□□□□ -2.45
LSM6P62312 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.27□□□□□ -2.45
LSM6P62312 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.27□□□□□ -2.45
LSM6P62312 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.27□□□□□ -2.45
LSM6P62312 PIGPP3-201ENST00000425307 415 ntBASIC-0.27□□□□□ -2.45
LSM6P62312 SEPT7P4-201ENST00000437076 306 ntBASIC-0.27□□□□□ -2.45
LSM6P62312 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.27□□□□□ -2.45
LSM6P62312 AC104408.1-201ENST00000605241 170 ntBASIC-0.27□□□□□ -2.45
LSM6P62312 AC007671.2-201ENST00000637344 619 ntBASIC-0.27□□□□□ -2.45
LSM6P62312 RNU6-280P-201ENST00000364145 104 ntBASIC-0.28□□□□□ -2.45
LSM6P62312 MIR450B-201ENST00000401182 78 ntBASIC-0.28□□□□□ -2.45
LSM6P62312 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.28□□□□□ -2.45
LSM6P62312 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.28□□□□□ -2.45
LSM6P62312 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.28□□□□□ -2.45
LSM6P62312 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.28□□□□□ -2.45
LSM6P62312 AC114811.1-201ENST00000507207 168 ntBASIC-0.28□□□□□ -2.45
LSM6P62312 RNA5SP330-201ENST00000517096 96 ntBASIC-0.28□□□□□ -2.45
LSM6P62312 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.28□□□□□ -2.45
LSM6P62312 AL158050.2-201ENST00000605336 568 ntBASIC-0.28□□□□□ -2.45
LSM6P62312 AC090517.2-201ENST00000614966 680 ntBASIC-0.28□□□□□ -2.45
LSM6P62312 AC104260.1-201ENST00000616660 539 ntBASIC-0.28□□□□□ -2.45
LSM6P62312 SNORA40.4-201ENST00000390971 128 ntBASIC-0.29□□□□□ -2.46
LSM6P62312 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.29□□□□□ -2.46
LSM6P62312 SNORA14.1-201ENST00000516113 141 ntBASIC-0.29□□□□□ -2.46
LSM6P62312 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.29□□□□□ -2.46
LSM6P62312 AC245014.2-201ENST00000603689 287 ntBASIC-0.29□□□□□ -2.46
LSM6P62312 AC246785.4-201ENST00000605374 287 ntBASIC-0.29□□□□□ -2.46
LSM6P62312 AC064836.2-201ENST00000609491 462 ntBASIC-0.29□□□□□ -2.46
LSM6P62312 MIR1295B-201ENST00000636144 60 ntBASIC-0.29□□□□□ -2.46
LSM6P62312 MTND4P12-201ENST00000498999 1377 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 RNU6-369P-201ENST00000362515 102 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 SNORD115-32-201ENST00000364079 82 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 SNORA32.1-201ENST00000364514 115 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 RNU6-716P-201ENST00000365621 103 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 AC117470.1-201ENST00000381974 330 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 MIR487A-201ENST00000385009 80 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 MIR610-201ENST00000385139 96 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 MTCYBP4-201ENST00000401524 249 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 AL008987.1-201ENST00000415528 237 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.3□□□□□ -2.46
LSM6P62312 MRPS10P2-201ENST00000431226 381 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 AC009961.2-201ENST00000435771 251 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 MTATP6P14-201ENST00000455189 673 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 AC107401.1-201ENST00000503426 685 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 SNORA18.7-201ENST00000516910 131 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 RNA5SP94-201ENST00000516917 108 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 AP002963.1-201ENST00000530590 184 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 MIR3678-201ENST00000578455 94 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 SNORA25.18-201ENST00000607153 114 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 AP000240.1-201ENST00000609910 452 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 MIR4251-201ENST00000635819 61 ntBASIC-0.3□□□□□ -2.46
LSM6P62312 SNORD113-6-201ENST00000363345 75 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 RNU6-727P-201ENST00000363592 107 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 RNU6-517P-201ENST00000384362 110 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 RNU6-456P-201ENST00000384493 107 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 MIR516B2-201ENST00000385190 85 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 MIR1302-7-201ENST00000408841 72 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 ZNF114P1-201ENST00000453500 292 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.31□□□□□ -2.46
LSM6P62312 RNA5SP20-201ENST00000515976 84 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 TUSC7.1-201ENST00000610969 165 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 AC087683.2-201ENST00000611384 326 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 AC009161.2-201ENST00000624626 138 ntBASIC-0.31□□□□□ -2.46
LSM6P62312 SNORA9.1-201ENST00000362412 131 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 SNORD68-201ENST00000363214 84 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 RNU6-873P-201ENST00000363833 107 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 RNU6-396P-201ENST00000365369 105 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 SNORA20B-201ENST00000384220 132 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 RNU6-933P-201ENST00000384424 107 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 MIR521-1-201ENST00000384902 87 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 RNU6-903P-201ENST00000391270 109 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 AC018865.2-201ENST00000423631 129 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.32□□□□□ -2.46
LSM6P62312 RNA5SP268-201ENST00000516828 124 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 ELOCP32-201ENST00000548625 324 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 AC016597.2-201ENST00000613256 341 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 MIR2909-201ENST00000617113 69 ntBASIC-0.32□□□□□ -2.46
LSM6P62312 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
LSM6P62312 U8.5-201ENST00000364528 136 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 U8.7-201ENST00000364940 136 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 RNU4-9P-201ENST00000364951 139 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 RNU6-407P-201ENST00000365280 104 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 RNU6V-201ENST00000384105 107 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 MIR153-2-201ENST00000385225 87 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 RNA5SP95-201ENST00000410319 137 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 RNU6-195P-201ENST00000411352 109 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 SSR1P2-201ENST00000415208 787 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 AL356010.1-201ENST00000456364 102 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 AC091179.3-201ENST00000474761 144 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.33□□□□□ -2.46
LSM6P62312 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
LSM6P62312 MIR377-201ENST00000362145 69 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 SNORD114-5-201ENST00000362928 70 ntBASIC-0.34□□□□□ -2.46
LSM6P62312 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms