Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.56□□□□□ -2.5
LSM3P62310 SNRPGP9-201ENST00000456025 225 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 RPL23AP75-201ENST00000491601 451 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 AC105417.1-201ENST00000514691 285 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 RNA5SP20-201ENST00000515976 84 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 SNORD27.1-201ENST00000516319 72 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 RNA5SP268-201ENST00000516828 124 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 AC092447.9-201ENST00000603395 144 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 AL591926.4-201ENST00000616895 298 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 SEPT14P19-203ENST00000633205 211 ntBASIC-0.56□□□□□ -2.5
LSM3P62310 RNU4-92P-201ENST00000363783 136 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 RNU6-873P-201ENST00000363833 107 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 MIR938-201ENST00000401216 83 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 AL365184.2-201ENST00000431139 435 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.57□□□□□ -2.5
LSM3P62310 RNU7-102P-201ENST00000458948 62 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 RNU7-159P-201ENST00000459284 62 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.57□□□□□ -2.5
LSM3P62310 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.57□□□□□ -2.5
LSM3P62310 MIR548AR-201ENST00000582191 57 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 AF250324.2-201ENST00000608299 610 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 AC091925.1-201ENST00000623204 462 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 AC013437.2-201ENST00000639587 677 ntBASIC-0.57□□□□□ -2.5
LSM3P62310 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
LSM3P62310 MIR377-201ENST00000362145 69 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 SNORD114-12-201ENST00000365400 75 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 MIR214-201ENST00000385214 110 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
LSM3P62310 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.58□□□□□ -2.5
LSM3P62310 AC079354.2-201ENST00000453523 154 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 RNU7-167P-201ENST00000459160 62 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 RPL17P19-201ENST00000489069 552 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 RNU6-237P-201ENST00000515985 71 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 AC104576.1-201ENST00000524225 88 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 MTND4P33-201ENST00000556706 766 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 Z94722.1-201ENST00000604328 474 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 AL138960.2-201ENST00000625145 535 ntBASIC-0.58□□□□□ -2.5
LSM3P62310 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 RNU6-125P-201ENST00000384505 107 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 MIR499A-201ENST00000384903 122 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 MIR15B-201ENST00000385045 98 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.59□□□□□ -2.5
LSM3P62310 AL606489.2-201ENST00000433886 234 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 AL353572.1-201ENST00000442490 417 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 RNU6-320P-201ENST00000516511 106 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 Vault.3-201ENST00000516676 95 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.59□□□□□ -2.5
LSM3P62310 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.59□□□□□ -2.5
LSM3P62310 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.59□□□□□ -2.5
LSM3P62310 AC018714.1-201ENST00000605028 208 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 RNU4-5P-201ENST00000607255 135 ntBASIC-0.59□□□□□ -2.5
LSM3P62310 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 RNA5SP432-201ENST00000362480 116 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 U8.5-201ENST00000364528 136 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 MTCO2P33-201ENST00000402100 465 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 RNU6-195P-201ENST00000411352 109 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.6□□□□□ -2.51
LSM3P62310 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.6□□□□□ -2.51
LSM3P62310 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.6□□□□□ -2.51
LSM3P62310 AC079140.5-201ENST00000507882 310 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 RNA5SP54-201ENST00000516951 92 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 AL358944.1-201ENST00000528537 144 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.6□□□□□ -2.51
LSM3P62310 MIR4743-201ENST00000584576 69 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 AC010525.2-201ENST00000590920 195 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 MIR6515-201ENST00000619843 57 ntBASIC-0.6□□□□□ -2.51
LSM3P62310 SNORA27.1-201ENST00000362604 124 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 RNU6-501P-201ENST00000364072 100 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 RNA5SP117-201ENST00000365294 118 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 RNU6-117P-201ENST00000365415 107 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 RNU6-83P-201ENST00000384568 112 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 RNU6-925P-201ENST00000384629 104 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 MT-TN-201ENST00000387400 73 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 RNU2-72P-201ENST00000411175 163 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 AL358176.2-201ENST00000425769 204 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 MTCO2P11-201ENST00000431069 680 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 GPR143P-201ENST00000434155 205 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 Z82188.1-201ENST00000436709 154 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 AL137792.2-201ENST00000443484 235 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 USP9YP12-201ENST00000450481 570 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 RNU7-165P-201ENST00000458864 60 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 RNU7-138P-201ENST00000459479 64 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.61□□□□□ -2.51
LSM3P62310 UBL5P4-201ENST00000562584 236 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 Z84480.1-201ENST00000605131 311 ntBASIC-0.61□□□□□ -2.51
LSM3P62310 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.61□□□□□ -2.51
LSM3P62310 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.61□□□□□ -2.51
LSM3P62310 SNORD115-8-201ENST00000363856 82 ntBASIC-0.62□□□□□ -2.51
LSM3P62310 SNORA1.1-201ENST00000364671 133 ntBASIC-0.62□□□□□ -2.51
LSM3P62310 SNORD115-38-201ENST00000365037 82 ntBASIC-0.62□□□□□ -2.51
LSM3P62310 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms