Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Y_RNA.106-201ENST00000363189 100 ntBASIC0.84□□□□□ -2.27
VSX2P58304 RNU1-124P-201ENST00000363861 145 ntBASIC0.84□□□□□ -2.27
VSX2P58304 Y_RNA.354-201ENST00000365448 111 ntBASIC0.84□□□□□ -2.27
VSX2P58304 MIR660-201ENST00000385235 97 ntBASIC0.84□□□□□ -2.27
VSX2P58304 U8.16-201ENST00000391279 133 ntBASIC0.84□□□□□ -2.27
VSX2P58304 AL034345.1-201ENST00000407768 123 ntBASIC0.84□□□□□ -2.27
VSX2P58304 RNU6-864P-201ENST00000516256 108 ntBASIC0.84□□□□□ -2.27
VSX2P58304 RNU6-1314P-201ENST00000517139 104 ntBASIC0.84□□□□□ -2.27
VSX2P58304 SNORA70.22-201ENST00000517160 124 ntBASIC0.84□□□□□ -2.27
VSX2P58304 AC134698.4-201ENST00000523451 826 ntBASIC0.84□□□□□ -2.27
VSX2P58304 AL590705.4-201ENST00000532209 134 ntBASIC0.84□□□□□ -2.27
VSX2P58304 AL357075.2-201ENST00000614906 189 ntBASIC0.84□□□□□ -2.27
VSX2P58304 AL513423.1-201ENST00000621695 132 ntBASIC0.84□□□□□ -2.27
VSX2P58304 AC100810.6-201ENST00000638068 285 ntBASIC0.84□□□□□ -2.27
VSX2P58304 AC005592.1-201ENST00000566527 1640 ntBASIC0.83□□□□□ -2.28
VSX2P58304 Y_RNA.184-201ENST00000363884 108 ntBASIC0.83□□□□□ -2.28
VSX2P58304 RNY1-201ENST00000364228 113 ntBASIC0.83□□□□□ -2.28
VSX2P58304 Y_RNA.301-201ENST00000364990 103 ntBASIC0.83□□□□□ -2.28
VSX2P58304 SNORA20B-201ENST00000384220 132 ntBASIC0.83□□□□□ -2.28
VSX2P58304 MIR653-201ENST00000385279 96 ntBASIC0.83□□□□□ -2.28
VSX2P58304 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
VSX2P58304 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
VSX2P58304 ELOCP21-201ENST00000412558 336 ntBASIC0.83□□□□□ -2.28
VSX2P58304 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
VSX2P58304 MRPS10P1-201ENST00000448483 130 ntBASIC0.83□□□□□ -2.28
VSX2P58304 AC010598.1-201ENST00000510378 103 ntBASIC0.83□□□□□ -2.28
VSX2P58304 SNORA31.2-201ENST00000516019 134 ntBASIC0.83□□□□□ -2.28
VSX2P58304 RNU6-947P-201ENST00000516264 106 ntBASIC0.83□□□□□ -2.28
VSX2P58304 RNU6-917P-201ENST00000516294 104 ntBASIC0.83□□□□□ -2.28
VSX2P58304 AL513534.2-201ENST00000603836 250 ntBASIC0.83□□□□□ -2.28
VSX2P58304 MIR6079-201ENST00000635807 62 ntBASIC0.83□□□□□ -2.28
VSX2P58304 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.83□□□□□ -2.28
VSX2P58304 MTND5P16-201ENST00000460269 1703 ntBASIC0.83□□□□□ -2.28
VSX2P58304 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VSX2P58304 RNU6-1266P-201ENST00000362794 105 ntBASIC0.82□□□□□ -2.28
VSX2P58304 RNY4P14-201ENST00000363656 96 ntBASIC0.82□□□□□ -2.28
VSX2P58304 RNU4-76P-201ENST00000364509 141 ntBASIC0.82□□□□□ -2.28
VSX2P58304 RNU4-24P-201ENST00000364565 139 ntBASIC0.82□□□□□ -2.28
VSX2P58304 RNU6-596P-201ENST00000365395 98 ntBASIC0.82□□□□□ -2.28
VSX2P58304 Y_RNA.402-201ENST00000383972 102 ntBASIC0.82□□□□□ -2.28
VSX2P58304 RNU6-566P-201ENST00000516790 107 ntBASIC0.82□□□□□ -2.28
VSX2P58304 AC109635.3-201ENST00000529536 185 ntBASIC0.82□□□□□ -2.28
VSX2P58304 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.82□□□□□ -2.28
VSX2P58304 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
VSX2P58304 AL020996.3-201ENST00000606617 222 ntBASIC0.82□□□□□ -2.28
VSX2P58304 MIR6128-201ENST00000615528 109 ntBASIC0.82□□□□□ -2.28
VSX2P58304 MIR6515-201ENST00000619843 57 ntBASIC0.82□□□□□ -2.28
VSX2P58304 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.82□□□□□ -2.28
VSX2P58304 ZNF299P-201ENST00000406845 1804 ntBASIC0.81□□□□□ -2.28
VSX2P58304 Y_RNA.436-201ENST00000384097 102 ntBASIC0.81□□□□□ -2.28
VSX2P58304 MIR329-1-201ENST00000385028 80 ntBASIC0.81□□□□□ -2.28
VSX2P58304 RNU6-1001P-201ENST00000411265 100 ntBASIC0.81□□□□□ -2.28
VSX2P58304 RNU6-1054P-201ENST00000411293 104 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AL589823.1-201ENST00000429577 183 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC002429.1-201ENST00000437672 148 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.81□□□□□ -2.28
VSX2P58304 HSPE1P13-201ENST00000451143 297 ntBASIC0.81□□□□□ -2.28
VSX2P58304 U8.22-201ENST00000459141 133 ntBASIC0.81□□□□□ -2.28
VSX2P58304 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC091021.1-201ENST00000468051 388 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.81□□□□□ -2.28
VSX2P58304 RPS26P48-201ENST00000491713 339 ntBASIC0.81□□□□□ -2.28
VSX2P58304 OR9P1P-201ENST00000496431 281 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC105758.1-201ENST00000506038 399 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC018710.1-201ENST00000506509 158 ntBASIC0.81□□□□□ -2.28
VSX2P58304 Y_RNA.683-201ENST00000516508 93 ntBASIC0.81□□□□□ -2.28
VSX2P58304 RNU7-172P-201ENST00000517125 64 ntBASIC0.81□□□□□ -2.28
VSX2P58304 APOOP3-201ENST00000536787 586 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC093023.1-201ENST00000547375 507 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC091178.2-201ENST00000584401 117 ntBASIC0.81□□□□□ -2.28
VSX2P58304 AC125232.2-201ENST00000592457 143 ntBASIC0.81□□□□□ -2.28
VSX2P58304 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
VSX2P58304 GHRLOS.1-201ENST00000610995 70 ntBASIC0.81□□□□□ -2.28
VSX2P58304 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
VSX2P58304 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
VSX2P58304 RNU6-874P-201ENST00000362390 105 ntBASIC0.8□□□□□ -2.28
VSX2P58304 Y_RNA.89-201ENST00000363031 102 ntBASIC0.8□□□□□ -2.28
VSX2P58304 RNU6-424P-201ENST00000384367 105 ntBASIC0.8□□□□□ -2.28
VSX2P58304 Z83846.1-201ENST00000446798 265 ntBASIC0.8□□□□□ -2.28
VSX2P58304 AC097462.1-201ENST00000514125 324 ntBASIC0.8□□□□□ -2.28
VSX2P58304 RNU6-1116P-201ENST00000517269 99 ntBASIC0.8□□□□□ -2.28
VSX2P58304 AP002001.1-203ENST00000534002 267 ntBASIC0.8□□□□□ -2.28
VSX2P58304 7SK.7-201ENST00000603504 247 ntBASIC0.8□□□□□ -2.28
VSX2P58304 MIRLET7C-201ENST00000362160 84 ntBASIC0.79□□□□□ -2.28
VSX2P58304 RNU4-79P-201ENST00000362764 141 ntBASIC0.79□□□□□ -2.28
VSX2P58304 RNU6-199P-201ENST00000362954 107 ntBASIC0.79□□□□□ -2.28
VSX2P58304 Y_RNA.124-201ENST00000363339 93 ntBASIC0.79□□□□□ -2.28
VSX2P58304 Y_RNA.267-201ENST00000364679 109 ntBASIC0.79□□□□□ -2.28
VSX2P58304 RNU6-136P-201ENST00000384663 107 ntBASIC0.79□□□□□ -2.28
VSX2P58304 RNU11-5P-201ENST00000391216 129 ntBASIC0.79□□□□□ -2.28
VSX2P58304 RNU1-139P-201ENST00000391307 165 ntBASIC0.79□□□□□ -2.28
VSX2P58304 EIF1P2-201ENST00000428233 350 ntBASIC0.79□□□□□ -2.28
VSX2P58304 MTND1P17-201ENST00000448961 204 ntBASIC0.79□□□□□ -2.28
VSX2P58304 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.79□□□□□ -2.28
VSX2P58304 snoU13.25-201ENST00000458945 104 ntBASIC0.79□□□□□ -2.28
VSX2P58304 RNU7-94P-201ENST00000459576 63 ntBASIC0.79□□□□□ -2.28
VSX2P58304 RPS29P25-201ENST00000481709 171 ntBASIC0.79□□□□□ -2.28
VSX2P58304 AC046134.1-201ENST00000514454 666 ntBASIC0.79□□□□□ -2.28
VSX2P58304 RNU6-1114P-201ENST00000516022 107 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms