Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPL23AP50-201ENST00000434149 455 ntBASIC1.45□□□□□ -2.18
VCPP55072 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
VCPP55072 RNU7-87P-201ENST00000459343 62 ntBASIC1.45□□□□□ -2.18
VCPP55072 Y_RNA.683-201ENST00000516508 93 ntBASIC1.45□□□□□ -2.18
VCPP55072 RNU6-307P-201ENST00000516743 106 ntBASIC1.45□□□□□ -2.18
VCPP55072 RNU6-1213P-201ENST00000517075 94 ntBASIC1.45□□□□□ -2.18
VCPP55072 AC093023.1-201ENST00000547375 507 ntBASIC1.45□□□□□ -2.18
VCPP55072 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.45□□□□□ -2.18
VCPP55072 AC090617.3-201ENST00000573670 475 ntBASIC1.45□□□□□ -2.18
VCPP55072 AL355073.2-201ENST00000612106 557 ntBASIC1.45□□□□□ -2.18
VCPP55072 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.45□□□□□ -2.18
VCPP55072 AC092794.2-201ENST00000620933 563 ntBASIC1.45□□□□□ -2.18
VCPP55072 AL669831.3-213ENST00000636676 183 ntBASIC1.45□□□□□ -2.18
VCPP55072 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.45□□□□□ -2.18
VCPP55072 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.44□□□□□ -2.18
VCPP55072 RNU6-874P-201ENST00000362390 105 ntBASIC1.44□□□□□ -2.18
VCPP55072 EBAG9P1-201ENST00000418955 543 ntBASIC1.44□□□□□ -2.18
VCPP55072 EIF1P2-201ENST00000428233 350 ntBASIC1.44□□□□□ -2.18
VCPP55072 HSPE1P9-201ENST00000440046 311 ntBASIC1.44□□□□□ -2.18
VCPP55072 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.44□□□□□ -2.18
VCPP55072 RNA5SP437-201ENST00000517249 129 ntBASIC1.44□□□□□ -2.18
VCPP55072 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.44□□□□□ -2.18
VCPP55072 SNORA77B-201ENST00000578179 125 ntBASIC1.44□□□□□ -2.18
VCPP55072 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
VCPP55072 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
VCPP55072 Y_RNA.68-201ENST00000362881 102 ntBASIC1.43□□□□□ -2.18
VCPP55072 SNORA33-201ENST00000363664 130 ntBASIC1.43□□□□□ -2.18
VCPP55072 SNORA63D-201ENST00000364359 132 ntBASIC1.43□□□□□ -2.18
VCPP55072 SNORA72.2-201ENST00000365028 127 ntBASIC1.43□□□□□ -2.18
VCPP55072 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
VCPP55072 Y_RNA.557-201ENST00000384680 107 ntBASIC1.43□□□□□ -2.18
VCPP55072 RNU6-1105P-201ENST00000384774 107 ntBASIC1.43□□□□□ -2.18
VCPP55072 MIR515-2-201ENST00000384883 83 ntBASIC1.43□□□□□ -2.18
VCPP55072 MIR515-1-201ENST00000384884 83 ntBASIC1.43□□□□□ -2.18
VCPP55072 RNU6-370P-201ENST00000411008 104 ntBASIC1.43□□□□□ -2.18
VCPP55072 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.43□□□□□ -2.18
VCPP55072 AC069257.2-201ENST00000441819 155 ntBASIC1.43□□□□□ -2.18
VCPP55072 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.43□□□□□ -2.18
VCPP55072 RPL17P19-201ENST00000489069 552 ntBASIC1.43□□□□□ -2.18
VCPP55072 AC125232.2-201ENST00000592457 143 ntBASIC1.43□□□□□ -2.18
VCPP55072 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.43□□□□□ -2.18
VCPP55072 MIR8063-201ENST00000621930 81 ntBASIC1.43□□□□□ -2.18
VCPP55072 Y_RNA.474-201ENST00000384341 102 ntBASIC1.42□□□□□ -2.18
VCPP55072 MIR329-1-201ENST00000385028 80 ntBASIC1.42□□□□□ -2.18
VCPP55072 RNU6-360P-201ENST00000390944 104 ntBASIC1.42□□□□□ -2.18
VCPP55072 RNA5SP467-201ENST00000391274 118 ntBASIC1.42□□□□□ -2.18
VCPP55072 RNU6-1001P-201ENST00000411265 100 ntBASIC1.42□□□□□ -2.18
VCPP55072 AC092423.1-201ENST00000430165 186 ntBASIC1.42□□□□□ -2.18
VCPP55072 MTND4P18-201ENST00000447010 465 ntBASIC1.42□□□□□ -2.18
VCPP55072 RPS26P55-201ENST00000471178 356 ntBASIC1.42□□□□□ -2.18
VCPP55072 AC099513.1-201ENST00000490423 301 ntBASIC1.42□□□□□ -2.18
VCPP55072 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
VCPP55072 AC091144.1-201ENST00000519573 138 ntBASIC1.42□□□□□ -2.18
VCPP55072 AC004584.2-201ENST00000570407 410 ntBASIC1.42□□□□□ -2.18
VCPP55072 MIR5690-201ENST00000583739 73 ntBASIC1.42□□□□□ -2.18
VCPP55072 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
VCPP55072 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VCPP55072 RNU6-1188P-201ENST00000363795 107 ntBASIC1.41□□□□□ -2.18
VCPP55072 Y_RNA.358-201ENST00000365491 99 ntBASIC1.41□□□□□ -2.18
VCPP55072 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.41□□□□□ -2.18
VCPP55072 MIR758-201ENST00000390227 88 ntBASIC1.41□□□□□ -2.18
VCPP55072 Y_RNA.646-201ENST00000410980 101 ntBASIC1.41□□□□□ -2.18
VCPP55072 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
VCPP55072 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.41□□□□□ -2.18
VCPP55072 UBE2V1P7-201ENST00000446395 340 ntBASIC1.41□□□□□ -2.18
VCPP55072 U8.22-201ENST00000459141 133 ntBASIC1.41□□□□□ -2.18
VCPP55072 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.41□□□□□ -2.18
VCPP55072 RNU6-107P-201ENST00000516643 102 ntBASIC1.41□□□□□ -2.18
VCPP55072 RNA5SP481-201ENST00000516814 122 ntBASIC1.41□□□□□ -2.18
VCPP55072 CYCSP23-201ENST00000519781 313 ntBASIC1.41□□□□□ -2.18
VCPP55072 AC024995.1-201ENST00000523014 93 ntBASIC1.41□□□□□ -2.18
VCPP55072 ICE2P2-201ENST00000483823 2787 ntBASIC1.4□□□□□ -2.19
VCPP55072 RNU6-879P-201ENST00000364328 108 ntBASIC1.4□□□□□ -2.19
VCPP55072 Y_RNA.251-201ENST00000364551 99 ntBASIC1.4□□□□□ -2.19
VCPP55072 RNU6-99P-201ENST00000364721 107 ntBASIC1.4□□□□□ -2.19
VCPP55072 RNU6-1145P-201ENST00000384246 107 ntBASIC1.4□□□□□ -2.19
VCPP55072 RNY1P4-201ENST00000384595 115 ntBASIC1.4□□□□□ -2.19
VCPP55072 RNU6-310P-201ENST00000384655 107 ntBASIC1.4□□□□□ -2.19
VCPP55072 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
VCPP55072 JTBP1-201ENST00000441314 247 ntBASIC1.4□□□□□ -2.19
VCPP55072 AC073910.1-201ENST00000445047 438 ntBASIC1.4□□□□□ -2.19
VCPP55072 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.4□□□□□ -2.19
VCPP55072 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
VCPP55072 RPL26P26-201ENST00000480251 434 ntBASIC1.4□□□□□ -2.19
VCPP55072 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.4□□□□□ -2.19
VCPP55072 AC022868.1-201ENST00000517767 391 ntBASIC1.4□□□□□ -2.19
VCPP55072 APOOP3-201ENST00000536787 586 ntBASIC1.4□□□□□ -2.19
VCPP55072 AC008269.2-201ENST00000561915 1105 ntBASIC1.4□□□□□ -2.19
VCPP55072 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
VCPP55072 FRG2DP-202ENST00000566967 323 ntBASIC1.4□□□□□ -2.19
VCPP55072 RN7SL793P-201ENST00000583259 296 ntBASIC1.4□□□□□ -2.19
VCPP55072 UBE2V2P2-201ENST00000587677 504 ntBASIC1.4□□□□□ -2.19
VCPP55072 AC113139.1-201ENST00000605049 239 ntBASIC1.4□□□□□ -2.19
VCPP55072 MIR1244-1-201ENST00000612829 85 ntBASIC1.4□□□□□ -2.19
VCPP55072 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.4□□□□□ -2.19
VCPP55072 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.4□□□□□ -2.19
VCPP55072 MIR1244-3-201ENST00000635744 85 ntBASIC1.4□□□□□ -2.19
VCPP55072 MIR1244-2-201ENST00000636449 85 ntBASIC1.4□□□□□ -2.19
VCPP55072 MIR1244-4-202ENST00000636813 85 ntBASIC1.4□□□□□ -2.19
VCPP55072 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms