Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC134698.4-201ENST00000523451 826 ntBASIC0.8□□□□□ -2.28
ACLYP53396 AL590705.4-201ENST00000532209 134 ntBASIC0.8□□□□□ -2.28
ACLYP53396 AC004812.1-201ENST00000540773 146 ntBASIC0.8□□□□□ -2.28
ACLYP53396 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.8□□□□□ -2.28
ACLYP53396 AL512605.2-201ENST00000592972 256 ntBASIC0.8□□□□□ -2.28
ACLYP53396 AL357312.1-201ENST00000603879 298 ntBASIC0.8□□□□□ -2.28
ACLYP53396 DISC2.1-201ENST00000612827 205 ntBASIC0.8□□□□□ -2.28
ACLYP53396 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.8□□□□□ -2.28
ACLYP53396 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.8□□□□□ -2.28
ACLYP53396 MIR6079-201ENST00000635807 62 ntBASIC0.8□□□□□ -2.28
ACLYP53396 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
ACLYP53396 Y_RNA.124-201ENST00000363339 93 ntBASIC0.79□□□□□ -2.28
ACLYP53396 Y_RNA.265-201ENST00000364677 108 ntBASIC0.79□□□□□ -2.28
ACLYP53396 Y_RNA.295-201ENST00000364918 102 ntBASIC0.79□□□□□ -2.28
ACLYP53396 Y_RNA.363-201ENST00000365529 113 ntBASIC0.79□□□□□ -2.28
ACLYP53396 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
ACLYP53396 AF228730.1-201ENST00000397972 663 ntBASIC0.79□□□□□ -2.28
ACLYP53396 AL355796.1-201ENST00000406706 323 ntBASIC0.79□□□□□ -2.28
ACLYP53396 RNA5SP193-201ENST00000410353 107 ntBASIC0.79□□□□□ -2.28
ACLYP53396 Y_RNA.615-201ENST00000410769 117 ntBASIC0.79□□□□□ -2.28
ACLYP53396 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.79□□□□□ -2.28
ACLYP53396 HMGN2P26-201ENST00000463169 339 ntBASIC0.79□□□□□ -2.28
ACLYP53396 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.79□□□□□ -2.28
ACLYP53396 AC010469.2-201ENST00000496412 480 ntBASIC0.79□□□□□ -2.28
ACLYP53396 PDCD5P2-201ENST00000507570 312 ntBASIC0.79□□□□□ -2.28
ACLYP53396 AC010598.1-201ENST00000510378 103 ntBASIC0.79□□□□□ -2.28
ACLYP53396 AC097462.1-201ENST00000514125 324 ntBASIC0.79□□□□□ -2.28
ACLYP53396 AC091144.1-201ENST00000519573 138 ntBASIC0.79□□□□□ -2.28
ACLYP53396 AL162413.1-201ENST00000603198 110 ntBASIC0.79□□□□□ -2.28
ACLYP53396 7SK.7-201ENST00000603504 247 ntBASIC0.79□□□□□ -2.28
ACLYP53396 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.79□□□□□ -2.28
ACLYP53396 AC010487.4-201ENST00000637027 61 ntBASIC0.79□□□□□ -2.28
ACLYP53396 Y_RNA.135-201ENST00000363439 95 ntBASIC0.78□□□□□ -2.28
ACLYP53396 SNORA80D-201ENST00000384488 135 ntBASIC0.78□□□□□ -2.28
ACLYP53396 Y_RNA.530-201ENST00000384587 101 ntBASIC0.78□□□□□ -2.28
ACLYP53396 MIR10B-201ENST00000385011 110 ntBASIC0.78□□□□□ -2.28
ACLYP53396 MTCO3P19-201ENST00000415864 321 ntBASIC0.78□□□□□ -2.28
ACLYP53396 AC114482.1-201ENST00000418010 247 ntBASIC0.78□□□□□ -2.28
ACLYP53396 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.78□□□□□ -2.28
ACLYP53396 RPL39P39-201ENST00000455840 151 ntBASIC0.78□□□□□ -2.28
ACLYP53396 RNU7-66P-201ENST00000459469 62 ntBASIC0.78□□□□□ -2.28
ACLYP53396 AC019235.1-201ENST00000503847 207 ntBASIC0.78□□□□□ -2.28
ACLYP53396 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
ACLYP53396 RNU6-1281P-201ENST00000516223 105 ntBASIC0.78□□□□□ -2.28
ACLYP53396 RNU2-56P-201ENST00000516826 190 ntBASIC0.78□□□□□ -2.28
ACLYP53396 AL121579.1-201ENST00000555129 305 ntBASIC0.78□□□□□ -2.28
ACLYP53396 MIR4711-201ENST00000578274 70 ntBASIC0.78□□□□□ -2.28
ACLYP53396 AC124303.1-201ENST00000605703 360 ntBASIC0.78□□□□□ -2.28
ACLYP53396 AC019193.3-201ENST00000609144 554 ntBASIC0.78□□□□□ -2.28
ACLYP53396 Z99129.1-201ENST00000612510 255 ntBASIC0.78□□□□□ -2.28
ACLYP53396 SNORA2.2-201ENST00000365473 135 ntBASIC0.77□□□□□ -2.29
ACLYP53396 SNORD116-9-201ENST00000384000 95 ntBASIC0.77□□□□□ -2.29
ACLYP53396 RNU6-483P-201ENST00000384088 108 ntBASIC0.77□□□□□ -2.29
ACLYP53396 SNORD116-3-201ENST00000384287 95 ntBASIC0.77□□□□□ -2.29
ACLYP53396 SNORD116-7-201ENST00000384404 95 ntBASIC0.77□□□□□ -2.29
ACLYP53396 SNORD116-5-201ENST00000384462 95 ntBASIC0.77□□□□□ -2.29
ACLYP53396 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
ACLYP53396 RNU6-780P-201ENST00000391030 104 ntBASIC0.77□□□□□ -2.29
ACLYP53396 U8.16-201ENST00000391279 133 ntBASIC0.77□□□□□ -2.29
ACLYP53396 RNU6-908P-201ENST00000410160 94 ntBASIC0.77□□□□□ -2.29
ACLYP53396 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
ACLYP53396 AC243428.1-201ENST00000421099 264 ntBASIC0.77□□□□□ -2.29
ACLYP53396 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.77□□□□□ -2.29
ACLYP53396 AP000870.1-201ENST00000472927 406 ntBASIC0.77□□□□□ -2.29
ACLYP53396 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.77□□□□□ -2.29
ACLYP53396 AC107401.1-201ENST00000503426 685 ntBASIC0.77□□□□□ -2.29
ACLYP53396 Y_RNA.688-201ENST00000516565 95 ntBASIC0.77□□□□□ -2.29
ACLYP53396 RNU6-256P-201ENST00000516747 97 ntBASIC0.77□□□□□ -2.29
ACLYP53396 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.77□□□□□ -2.29
ACLYP53396 MIR5696-201ENST00000578474 85 ntBASIC0.77□□□□□ -2.29
ACLYP53396 AC010999.1-201ENST00000611856 324 ntBASIC0.77□□□□□ -2.29
ACLYP53396 RNA5SP347-201ENST00000362445 119 ntBASIC0.76□□□□□ -2.29
ACLYP53396 RNA5SP457-201ENST00000363657 124 ntBASIC0.76□□□□□ -2.29
ACLYP53396 RNU6-969P-201ENST00000383900 105 ntBASIC0.76□□□□□ -2.29
ACLYP53396 MIR562-201ENST00000384894 95 ntBASIC0.76□□□□□ -2.29
ACLYP53396 ZNF885P-201ENST00000420174 1098 ntBASIC0.76□□□□□ -2.29
ACLYP53396 MTATP6P13-201ENST00000438531 667 ntBASIC0.76□□□□□ -2.29
ACLYP53396 AC117454.1-201ENST00000491120 168 ntBASIC0.76□□□□□ -2.29
ACLYP53396 OR9P1P-201ENST00000496431 281 ntBASIC0.76□□□□□ -2.29
ACLYP53396 AC022493.2-201ENST00000506122 481 ntBASIC0.76□□□□□ -2.29
ACLYP53396 RNU6-107P-201ENST00000516643 102 ntBASIC0.76□□□□□ -2.29
ACLYP53396 RNU7-28P-201ENST00000516759 62 ntBASIC0.76□□□□□ -2.29
ACLYP53396 RNU7-172P-201ENST00000517125 64 ntBASIC0.76□□□□□ -2.29
ACLYP53396 MIR3672-201ENST00000584290 82 ntBASIC0.76□□□□□ -2.29
ACLYP53396 AC245008.1-201ENST00000608123 476 ntBASIC0.76□□□□□ -2.29
ACLYP53396 Y_RNA.256-201ENST00000364594 104 ntBASIC0.75□□□□□ -2.29
ACLYP53396 MTCO2P7-201ENST00000446518 666 ntBASIC0.75□□□□□ -2.29
ACLYP53396 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.75□□□□□ -2.29
ACLYP53396 RNU7-175P-201ENST00000515915 61 ntBASIC0.75□□□□□ -2.29
ACLYP53396 Y_RNA.683-201ENST00000516508 93 ntBASIC0.75□□□□□ -2.29
ACLYP53396 RNU6-197P-201ENST00000516680 100 ntBASIC0.75□□□□□ -2.29
ACLYP53396 Y_RNA.704-201ENST00000516851 102 ntBASIC0.75□□□□□ -2.29
ACLYP53396 AC090142.3-201ENST00000519012 385 ntBASIC0.75□□□□□ -2.29
ACLYP53396 RPL21P9-201ENST00000556149 474 ntBASIC0.75□□□□□ -2.29
ACLYP53396 AC068790.6-201ENST00000602558 258 ntBASIC0.75□□□□□ -2.29
ACLYP53396 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
ACLYP53396 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
ACLYP53396 Y_RNA.115-201ENST00000363272 98 ntBASIC0.74□□□□□ -2.29
ACLYP53396 Y_RNA.212-201ENST00000364177 102 ntBASIC0.74□□□□□ -2.29
ACLYP53396 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms