Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.75□□□□□ -2.13
PDX1P52945 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
PDX1P52945 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.75□□□□□ -2.13
PDX1P52945 AC008749.1-201ENST00000597650 306 ntBASIC1.75□□□□□ -2.13
PDX1P52945 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.75□□□□□ -2.13
PDX1P52945 AC240442.1-201ENST00000616055 283 ntBASIC1.75□□□□□ -2.13
PDX1P52945 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.75□□□□□ -2.13
PDX1P52945 AC091932.3-201ENST00000624223 323 ntBASIC1.75□□□□□ -2.13
PDX1P52945 MIR3674-201ENST00000636576 68 ntBASIC1.75□□□□□ -2.13
PDX1P52945 CENPCP1-201ENST00000533085 2578 ntBASIC1.74□□□□□ -2.13
PDX1P52945 RNU6-450P-201ENST00000364654 107 ntBASIC1.74□□□□□ -2.13
PDX1P52945 RNU6-1240P-201ENST00000365155 104 ntBASIC1.74□□□□□ -2.13
PDX1P52945 MIR1302-11-201ENST00000408051 138 ntBASIC1.74□□□□□ -2.13
PDX1P52945 MIR1302-9-201ENST00000408365 138 ntBASIC1.74□□□□□ -2.13
PDX1P52945 MIR1302-10-201ENST00000408734 138 ntBASIC1.74□□□□□ -2.13
PDX1P52945 MTCO3P19-201ENST00000415864 321 ntBASIC1.74□□□□□ -2.13
PDX1P52945 AL158823.1-201ENST00000418441 478 ntBASIC1.74□□□□□ -2.13
PDX1P52945 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.74□□□□□ -2.13
PDX1P52945 AL163540.1-201ENST00000485382 386 ntBASIC1.74□□□□□ -2.13
PDX1P52945 RNU6-475P-201ENST00000516073 104 ntBASIC1.74□□□□□ -2.13
PDX1P52945 AC027419.1-201ENST00000522976 328 ntBASIC1.74□□□□□ -2.13
PDX1P52945 AC040926.1-201ENST00000530195 238 ntBASIC1.74□□□□□ -2.13
PDX1P52945 SUB1P4-201ENST00000566062 339 ntBASIC1.74□□□□□ -2.13
PDX1P52945 MIR4299-201ENST00000577899 72 ntBASIC1.74□□□□□ -2.13
PDX1P52945 AC044792.1-201ENST00000593294 196 ntBASIC1.74□□□□□ -2.13
PDX1P52945 MIR1302-2-201ENST00000607096 138 ntBASIC1.74□□□□□ -2.13
PDX1P52945 PART1_1.1-201ENST00000611761 217 ntBASIC1.74□□□□□ -2.13
PDX1P52945 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
PDX1P52945 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PDX1P52945 MIR378A-201ENST00000362177 66 ntBASIC1.73□□□□□ -2.13
PDX1P52945 Y_RNA.226-201ENST00000364337 114 ntBASIC1.73□□□□□ -2.13
PDX1P52945 RNA5SP467-201ENST00000391274 118 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AL355796.1-201ENST00000406706 323 ntBASIC1.73□□□□□ -2.13
PDX1P52945 MIR1253-201ENST00000408273 105 ntBASIC1.73□□□□□ -2.13
PDX1P52945 RNA5SP489-201ENST00000410986 109 ntBASIC1.73□□□□□ -2.13
PDX1P52945 RNU6-130P-201ENST00000411112 103 ntBASIC1.73□□□□□ -2.13
PDX1P52945 BTF3P4-201ENST00000418852 495 ntBASIC1.73□□□□□ -2.13
PDX1P52945 CST2P1-201ENST00000425770 87 ntBASIC1.73□□□□□ -2.13
PDX1P52945 RPEP5-201ENST00000441137 268 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.73□□□□□ -2.13
PDX1P52945 SNORD65B-201ENST00000459126 73 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AC010409.1-201ENST00000487382 476 ntBASIC1.73□□□□□ -2.13
PDX1P52945 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AC107393.1-201ENST00000512403 346 ntBASIC1.73□□□□□ -2.13
PDX1P52945 SNORA25.10-201ENST00000515926 124 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.73□□□□□ -2.13
PDX1P52945 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
PDX1P52945 MIR4781-201ENST00000585250 76 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AL356055.1-201ENST00000602528 446 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AC069114.2-201ENST00000604699 304 ntBASIC1.73□□□□□ -2.13
PDX1P52945 AL021879.1-201ENST00000611756 288 ntBASIC1.73□□□□□ -2.13
PDX1P52945 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.73□□□□□ -2.13
PDX1P52945 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.73□□□□□ -2.13
PDX1P52945 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PDX1P52945 RNU6-1266P-201ENST00000362794 105 ntBASIC1.72□□□□□ -2.13
PDX1P52945 Y_RNA.101-201ENST00000363154 102 ntBASIC1.72□□□□□ -2.13
PDX1P52945 RNU6-694P-201ENST00000364071 147 ntBASIC1.72□□□□□ -2.13
PDX1P52945 RNU6-20P-201ENST00000384106 107 ntBASIC1.72□□□□□ -2.13
PDX1P52945 Y_RNA.458-201ENST00000384240 102 ntBASIC1.72□□□□□ -2.13
PDX1P52945 RNU4-62P-201ENST00000410125 130 ntBASIC1.72□□□□□ -2.13
PDX1P52945 RNU7-128P-201ENST00000517247 62 ntBASIC1.72□□□□□ -2.13
PDX1P52945 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PDX1P52945 MIR4303-201ENST00000581299 66 ntBASIC1.72□□□□□ -2.13
PDX1P52945 AC022432.1-201ENST00000595739 310 ntBASIC1.72□□□□□ -2.13
PDX1P52945 AC104695.3-201ENST00000604052 296 ntBASIC1.72□□□□□ -2.13
PDX1P52945 U1.36-201ENST00000620684 176 ntBASIC1.72□□□□□ -2.13
PDX1P52945 U6.108-201ENST00000637764 58 ntBASIC1.72□□□□□ -2.13
PDX1P52945 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.72□□□□□ -2.13
PDX1P52945 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
PDX1P52945 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PDX1P52945 Y_RNA.124-201ENST00000363339 93 ntBASIC1.71□□□□□ -2.14
PDX1P52945 RNU6-112P-201ENST00000363599 104 ntBASIC1.71□□□□□ -2.14
PDX1P52945 RNU4-76P-201ENST00000364509 141 ntBASIC1.71□□□□□ -2.14
PDX1P52945 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
PDX1P52945 SNORA20B-201ENST00000384220 132 ntBASIC1.71□□□□□ -2.14
PDX1P52945 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
PDX1P52945 MRPL42P3-201ENST00000401492 326 ntBASIC1.71□□□□□ -2.14
PDX1P52945 RNU6-321P-201ENST00000410912 106 ntBASIC1.71□□□□□ -2.14
PDX1P52945 AC244636.1-201ENST00000421152 228 ntBASIC1.71□□□□□ -2.14
PDX1P52945 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.71□□□□□ -2.14
PDX1P52945 AC005002.2-201ENST00000438228 269 ntBASIC1.71□□□□□ -2.14
PDX1P52945 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.71□□□□□ -2.14
PDX1P52945 RN7SL274P-201ENST00000492268 272 ntBASIC1.71□□□□□ -2.14
PDX1P52945 SNORA31.17-201ENST00000516953 127 ntBASIC1.71□□□□□ -2.14
PDX1P52945 RNU2-12P-201ENST00000517216 168 ntBASIC1.71□□□□□ -2.14
PDX1P52945 RNA5SP437-201ENST00000517249 129 ntBASIC1.71□□□□□ -2.14
PDX1P52945 RNU6-988P-201ENST00000519081 107 ntBASIC1.71□□□□□ -2.14
PDX1P52945 AC023157.2-201ENST00000540596 141 ntBASIC1.71□□□□□ -2.14
PDX1P52945 AC022254.1-201ENST00000567857 235 ntBASIC1.71□□□□□ -2.14
PDX1P52945 AL390123.1-201ENST00000603216 237 ntBASIC1.71□□□□□ -2.14
PDX1P52945 AL773524.1-201ENST00000614065 229 ntBASIC1.71□□□□□ -2.14
PDX1P52945 AC004467.1-201ENST00000615678 330 ntBASIC1.71□□□□□ -2.14
PDX1P52945 SDR42E1P4-201ENST00000620894 481 ntBASIC1.71□□□□□ -2.14
PDX1P52945 U6.115-201ENST00000636045 103 ntBASIC1.71□□□□□ -2.14
PDX1P52945 RNU6-626P-201ENST00000363354 107 ntBASIC1.7□□□□□ -2.14
PDX1P52945 SNORD14.1-201ENST00000365609 90 ntBASIC1.7□□□□□ -2.14
PDX1P52945 RNU6-1227P-201ENST00000383981 107 ntBASIC1.7□□□□□ -2.14
PDX1P52945 Y_RNA.471-201ENST00000384312 102 ntBASIC1.7□□□□□ -2.14
PDX1P52945 AC009310.1-201ENST00000414414 451 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms