Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AL606489.2-201ENST00000433886 234 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 Z98949.2-201ENST00000440996 144 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 RPS27P22-201ENST00000478056 241 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 SNORA31.2-201ENST00000516019 134 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 RNU6-1278P-201ENST00000516130 107 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 RNA5SP454-201ENST00000517231 127 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.71□□□□□ -2.3
BRCA1P38398 RPL21P9-201ENST00000556149 474 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
BRCA1P38398 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.71□□□□□ -2.3
BRCA1P38398 RNA5SP482-201ENST00000391269 118 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 RNA5SP127-201ENST00000411051 133 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 SEPT14P3-201ENST00000439401 183 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 AC093019.1-201ENST00000443135 252 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 AL732372.2-207ENST00000445840 183 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 SEPT14P2-201ENST00000453405 183 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 RPS3AP17-201ENST00000472594 777 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 AC019235.1-201ENST00000503847 207 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 SEPT14P4-201ENST00000513445 186 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 RNU7-175P-201ENST00000515915 61 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 Y_RNA.688-201ENST00000516565 95 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 FO082796.1-201ENST00000523795 183 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.71□□□□□ -2.3
BRCA1P38398 AC019288.1-201ENST00000557918 224 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.71□□□□□ -2.3
BRCA1P38398 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
BRCA1P38398 Y_RNA.38-201ENST00000362617 102 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 Y_RNA.231-201ENST00000364358 102 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 Y_RNA.373-201ENST00000365600 103 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 Y_RNA.402-201ENST00000383972 102 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 Z82188.1-201ENST00000436709 154 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 AC079354.2-201ENST00000453523 154 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 MTND1P11-201ENST00000456661 876 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 RPS26P48-201ENST00000491713 339 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 AL133373.1-201ENST00000497098 94 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 RNU7-12P-201ENST00000516030 62 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 MTND1P5-201ENST00000517906 940 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 AC109810.1-201ENST00000534066 224 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 AC019193.3-201ENST00000609144 554 ntBASIC0.7□□□□□ -2.3
BRCA1P38398 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
BRCA1P38398 SNORD114-7-201ENST00000362520 77 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 Y_RNA.265-201ENST00000364677 108 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 RNU6-1119P-201ENST00000384349 108 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 MIR487A-201ENST00000385009 80 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 MIR10B-201ENST00000385011 110 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 RNA5SP63-201ENST00000391225 112 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 MRPL42P3-201ENST00000401492 326 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AL034345.1-201ENST00000407768 123 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AC243428.1-201ENST00000421099 264 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AC063976.4-201ENST00000421971 163 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 MTCO1P20-201ENST00000425366 358 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.69□□□□□ -2.3
BRCA1P38398 RNU7-28P-201ENST00000516759 62 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AL590705.4-201ENST00000532209 134 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AC027288.2-201ENST00000553028 243 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AL121579.1-201ENST00000555129 305 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
BRCA1P38398 SNORD87-201ENST00000364849 89 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 RNU6-281P-201ENST00000384212 103 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 MIR660-201ENST00000385235 97 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 RNA5SP168-201ENST00000516642 112 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AC090142.3-201ENST00000519012 385 ntBASIC0.69□□□□□ -2.3
BRCA1P38398 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.69□□□□□ -2.3
BRCA1P38398 U3.8-201ENST00000363675 217 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 Y_RNA.194-201ENST00000363985 102 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 RNU6-522P-201ENST00000364497 107 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 SNORA80D-201ENST00000384488 135 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 Y_RNA.582-201ENST00000391023 95 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 AL355796.1-201ENST00000406706 323 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 RNA5SP475-201ENST00000410568 110 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 RNU6-373P-201ENST00000411247 98 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 MTND3P23-201ENST00000431980 347 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 DAP3P1-201ENST00000441522 278 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.68□□□□□ -2.3
BRCA1P38398 SNORD5.1-201ENST00000458800 75 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 HMGN2P26-201ENST00000463169 339 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 RNU6-322P-201ENST00000516010 103 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 RNU6-566P-201ENST00000516790 107 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 PIGPP4-201ENST00000584447 307 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 AC010525.2-201ENST00000590920 195 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.68□□□□□ -2.3
BRCA1P38398 AL391516.1-201ENST00000554380 2449 ntBASIC0.68□□□□□ -2.3
BRCA1P38398 Y_RNA.41-201ENST00000362646 102 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 RNA5SP109-201ENST00000391010 116 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 RPL30P16-201ENST00000419341 429 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 RNU6-1088P-201ENST00000516850 104 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.67□□□□□ -2.3
BRCA1P38398 AL512360.1-201ENST00000555346 234 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 AL021879.1-201ENST00000611756 288 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.67□□□□□ -2.3
BRCA1P38398 AC027279.3-201ENST00000625055 122 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
BRCA1P38398 Y_RNA.256-201ENST00000364594 104 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 RNU6-424P-201ENST00000384367 105 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 Y_RNA.533-201ENST00000384596 114 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 RNU2-70P-201ENST00000410718 179 ntBASIC0.67□□□□□ -2.3
BRCA1P38398 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.67□□□□□ -2.3
BRCA1P38398 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms