Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNY3P9-201ENST00000384727 106 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 RNU5A-5P-201ENST00000411054 116 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.12□□□□□ -2.39
HLA-DMBP28068 Z98949.2-201ENST00000440996 144 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.12□□□□□ -2.39
HLA-DMBP28068 TPTE2P5-203ENST00000458118 728 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 RNU7-63P-201ENST00000459054 62 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 AC107401.1-201ENST00000503426 685 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 RNU11-2P-201ENST00000516898 142 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 RNU6-1116P-201ENST00000517269 99 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 AL358944.1-201ENST00000528537 144 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.12□□□□□ -2.39
HLA-DMBP28068 MIR5692C1-201ENST00000585309 91 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 AL158209.2-201ENST00000619266 216 ntBASIC0.12□□□□□ -2.39
HLA-DMBP28068 AC073544.1-201ENST00000600110 1595 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 SNORA25.3-201ENST00000363205 127 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 RNU6-727P-201ENST00000363592 107 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 RNU4-9P-201ENST00000364951 139 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 Y_RNA.319-201ENST00000365138 92 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 RNU6-1297P-201ENST00000384415 104 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 AL606923.1-201ENST00000406616 190 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 ZNF885P-201ENST00000420174 1098 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.11□□□□□ -2.39
HLA-DMBP28068 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.11□□□□□ -2.39
HLA-DMBP28068 CYCTP-201ENST00000504253 315 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 RNU7-41P-201ENST00000515917 61 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 SCARNA1-201ENST00000517138 166 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 AC100830.2-201ENST00000581636 240 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 AL158063.1-201ENST00000615349 536 ntBASIC0.11□□□□□ -2.39
HLA-DMBP28068 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.11□□□□□ -2.39
HLA-DMBP28068 RNA5SP457-201ENST00000363657 124 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 Y_RNA.184-201ENST00000363884 108 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 MIR32-201ENST00000384965 70 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 MIR452-201ENST00000385020 85 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 MIR625-201ENST00000385047 85 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 MIR153-2-201ENST00000385225 87 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 MTCO2P16-201ENST00000436962 677 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.1□□□□□ -2.39
HLA-DMBP28068 SNORA74.3-201ENST00000517108 154 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 RNU6-232P-201ENST00000517144 64 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.1□□□□□ -2.39
HLA-DMBP28068 AC120024.3-201ENST00000603167 156 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 AL357078.3-201ENST00000607528 618 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 AL133215.3-201ENST00000609801 448 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 AL109933.3-201ENST00000619095 188 ntBASIC0.1□□□□□ -2.39
HLA-DMBP28068 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.1□□□□□ -2.39
HLA-DMBP28068 Y_RNA.85-201ENST00000363014 111 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 RNA5SP48-201ENST00000363969 126 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 SNORD113.3-201ENST00000364630 78 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 SNORA20B-201ENST00000384220 132 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 RNU5A-2P-201ENST00000384337 116 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 RNU6-159P-201ENST00000391080 106 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 RNA5SP63-201ENST00000391225 112 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 RNU6-994P-201ENST00000410507 111 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 RNA5SP127-201ENST00000411051 133 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 Z82188.1-201ENST00000436709 154 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 AC093303.1-201ENST00000514549 295 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 RNU6-1291P-201ENST00000516591 104 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 AC091144.1-201ENST00000519573 138 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.09□□□□□ -2.4
HLA-DMBP28068 MIR3913-1-201ENST00000577744 102 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 PIGPP4-201ENST00000584447 307 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 AC092747.3-201ENST00000603769 301 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 AC100812.1-201ENST00000607622 580 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 AC072046.2-201ENST00000618366 268 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 AF246928.1-201ENST00000623768 87 ntBASIC0.09□□□□□ -2.4
HLA-DMBP28068 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
HLA-DMBP28068 RNU5F-3P-201ENST00000363767 117 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 RNU6-280P-201ENST00000364145 104 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 RNU6-933P-201ENST00000384424 107 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 MIR520C-201ENST00000385005 87 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.08□□□□□ -2.4
HLA-DMBP28068 MTCO1P20-201ENST00000425366 358 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.08□□□□□ -2.4
HLA-DMBP28068 AL392103.1-201ENST00000447000 198 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 RNU7-125P-201ENST00000458760 62 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 MTND3P3-201ENST00000505004 126 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 AL118558.2-201ENST00000556294 238 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 AC009094.1-201ENST00000564443 426 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 MIR3684-201ENST00000579779 74 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 AC104695.3-201ENST00000604052 296 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 AC007684.1-201ENST00000609671 477 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 AC010999.1-201ENST00000611856 324 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 MIR6718-201ENST00000616153 80 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 AC006504.8-201ENST00000621046 635 ntBASIC0.08□□□□□ -2.4
HLA-DMBP28068 Y_RNA.179-201ENST00000363844 90 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 Y_RNA.201-201ENST00000364052 96 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 RNU6-214P-201ENST00000384130 107 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 Y_RNA.476-201ENST00000384347 108 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 MIR573-201ENST00000384964 99 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 MIR520G-201ENST00000385064 90 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
HLA-DMBP28068 RNU6-1158P-201ENST00000391167 107 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 AL590002.1-201ENST00000406554 418 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.07□□□□□ -2.4
HLA-DMBP28068 MTND2P18-201ENST00000419962 1030 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms