Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNU6-1266P-201ENST00000362794 105 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 Y_RNA.267-201ENST00000364679 109 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 Y_RNA.295-201ENST00000364918 102 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.69□□□□□ -2.3
HLA-DMAP28067 Y_RNA.450-201ENST00000384198 113 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 RNU6-136P-201ENST00000384663 107 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 MIR181A1-201ENST00000385026 110 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 RNU1-139P-201ENST00000391307 165 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 AC114482.1-201ENST00000418010 247 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 EIF1P2-201ENST00000428233 350 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.69□□□□□ -2.3
HLA-DMAP28067 SNORD5.1-201ENST00000458800 75 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 snoU13.25-201ENST00000458945 104 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 SNORD124-201ENST00000459577 104 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 COX6CP14-201ENST00000469580 174 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 AC105758.1-201ENST00000506038 399 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 AC097462.1-201ENST00000514125 324 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 Y_RNA.682-201ENST00000516457 100 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 Y_RNA.683-201ENST00000516508 93 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 RNU7-172P-201ENST00000517125 64 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.69□□□□□ -2.3
HLA-DMAP28067 AL117336.2-201ENST00000602435 335 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 AC080078.3-201ENST00000605407 463 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 AC005014.2-201ENST00000607795 599 ntBASIC0.69□□□□□ -2.3
HLA-DMAP28067 MIRLET7C-201ENST00000362160 84 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 SNORA1B-201ENST00000362535 133 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU6-454P-201ENST00000364292 107 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 Y_RNA.318-201ENST00000365131 97 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU4-12P-201ENST00000365233 139 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU6-1145P-201ENST00000384246 107 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU6-424P-201ENST00000384367 105 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 Y_RNA.516-201ENST00000384541 124 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 Y_RNA.557-201ENST00000384680 107 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU6-373P-201ENST00000411247 98 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU6-1054P-201ENST00000411293 104 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 USP9YP16-201ENST00000430287 407 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 MTND3P21-201ENST00000433774 331 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 AC002429.1-201ENST00000437672 148 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 USP9YP23-201ENST00000455085 407 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 AC092989.1-201ENST00000481235 277 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 PDCD5P2-201ENST00000507570 312 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 AC026782.1-201ENST00000512952 449 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 AC046134.1-201ENST00000514454 666 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU6-1114P-201ENST00000516022 107 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 RNU6-1291P-201ENST00000516591 104 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 APOOP3-201ENST00000536787 586 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 MIR3662-201ENST00000637030 95 ntBASIC0.68□□□□□ -2.3
HLA-DMAP28067 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 Y_RNA.9-201ENST00000362354 101 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 RNU6-199P-201ENST00000362954 107 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 Y_RNA.124-201ENST00000363339 93 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 Y_RNA.265-201ENST00000364677 108 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 RNU6-407P-201ENST00000365280 104 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 MIR200A-201ENST00000384875 90 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 SNORD115-47-201ENST00000391226 86 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HLA-DMAP28067 Y_RNA.595-201ENST00000410403 105 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 AC063976.4-201ENST00000421971 163 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 AC245047.7-201ENST00000440265 293 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 Z98949.2-201ENST00000440996 144 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-DMAP28067 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.67□□□□□ -2.3
HLA-DMAP28067 MTND5P5-201ENST00000503764 376 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 RNA5SP20-201ENST00000515976 84 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 Y_RNA.670-201ENST00000516255 105 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 RNU6-63P-201ENST00000516690 95 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 Y_RNA.706-201ENST00000516933 99 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 MIR4698-201ENST00000577795 80 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 MIR5701-3-201ENST00000578890 82 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 MIR5701-1-201ENST00000585138 82 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 7SK.7-201ENST00000603504 247 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 AC012557.2-201ENST00000605919 418 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 GHRLOS.1-201ENST00000610995 70 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 MIR5701-2-201ENST00000615634 82 ntBASIC0.67□□□□□ -2.3
HLA-DMAP28067 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HLA-DMAP28067 RNU4-79P-201ENST00000362764 141 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 MIR532-201ENST00000385025 91 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 MIR190B-201ENST00000401119 79 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 MIR548F1-201ENST00000408667 84 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.66□□□□□ -2.3
HLA-DMAP28067 MTCO3P19-201ENST00000415864 321 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 AC018865.2-201ENST00000423631 129 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 USMG5P1-201ENST00000425964 177 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 AC104332.1-201ENST00000440471 797 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 MTND4LP16-201ENST00000440828 295 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 RNU7-87P-201ENST00000459343 62 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 RNU7-94P-201ENST00000459576 63 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.66□□□□□ -2.3
HLA-DMAP28067 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.66□□□□□ -2.3
HLA-DMAP28067 RNU7-12P-201ENST00000516030 62 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 RNU6-720P-201ENST00000516363 108 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 RNU6-197P-201ENST00000516680 100 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 RNU1-54P-201ENST00000517181 120 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 AC090049.2-201ENST00000550377 109 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms