Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC079248.2-201ENST00000623779 326 ntBASIC0.04□□□□□ -2.4
CCL1P22362 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CCL1P22362 SNORA20B-201ENST00000384220 132 ntBASIC0.03□□□□□ -2.4
CCL1P22362 MIR136-201ENST00000385207 82 ntBASIC0.03□□□□□ -2.4
CCL1P22362 RNU6-159P-201ENST00000391080 106 ntBASIC0.03□□□□□ -2.4
CCL1P22362 RNU2-70P-201ENST00000410718 179 ntBASIC0.03□□□□□ -2.4
CCL1P22362 AC243428.1-201ENST00000421099 264 ntBASIC0.03□□□□□ -2.4
CCL1P22362 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.03□□□□□ -2.4
CCL1P22362 RNA5SP20-201ENST00000515976 84 ntBASIC0.03□□□□□ -2.4
CCL1P22362 RNU6-1096P-201ENST00000517089 102 ntBASIC0.03□□□□□ -2.4
CCL1P22362 SCARNA1-201ENST00000517138 166 ntBASIC0.03□□□□□ -2.4
CCL1P22362 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.03□□□□□ -2.4
CCL1P22362 AC093027.1-201ENST00000546698 429 ntBASIC0.03□□□□□ -2.4
CCL1P22362 MIR4764-201ENST00000580680 88 ntBASIC0.03□□□□□ -2.4
CCL1P22362 AC092747.3-201ENST00000603769 301 ntBASIC0.03□□□□□ -2.4
CCL1P22362 AL133215.3-201ENST00000609801 448 ntBASIC0.03□□□□□ -2.4
CCL1P22362 AC109347.2-201ENST00000610220 349 ntBASIC0.03□□□□□ -2.4
CCL1P22362 AL138726.1-201ENST00000614873 333 ntBASIC0.03□□□□□ -2.4
CCL1P22362 AC092634.7-201ENST00000621022 103 ntBASIC0.03□□□□□ -2.4
CCL1P22362 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CCL1P22362 SNORD50.1-201ENST00000362987 71 ntBASIC0.02□□□□□ -2.41
CCL1P22362 RNU5A-6P-201ENST00000384136 116 ntBASIC0.02□□□□□ -2.41
CCL1P22362 RNY1P14-201ENST00000384426 108 ntBASIC0.02□□□□□ -2.41
CCL1P22362 RNU6-1105P-201ENST00000384774 107 ntBASIC0.02□□□□□ -2.41
CCL1P22362 MIR1298-201ENST00000408783 112 ntBASIC0.02□□□□□ -2.41
CCL1P22362 AC018865.2-201ENST00000423631 129 ntBASIC0.02□□□□□ -2.41
CCL1P22362 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.02□□□□□ -2.41
CCL1P22362 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.02□□□□□ -2.41
CCL1P22362 MTND1P4-201ENST00000435196 415 ntBASIC0.02□□□□□ -2.41
CCL1P22362 MTCO2P16-201ENST00000436962 677 ntBASIC0.02□□□□□ -2.41
CCL1P22362 AC079354.2-201ENST00000453523 154 ntBASIC0.02□□□□□ -2.41
CCL1P22362 SNORA19.2-201ENST00000516013 114 ntBASIC0.02□□□□□ -2.41
CCL1P22362 RNU6-232P-201ENST00000517144 64 ntBASIC0.02□□□□□ -2.41
CCL1P22362 AC091144.1-201ENST00000519573 138 ntBASIC0.02□□□□□ -2.41
CCL1P22362 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.02□□□□□ -2.41
CCL1P22362 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.02□□□□□ -2.41
CCL1P22362 MIR4431-201ENST00000579990 94 ntBASIC0.02□□□□□ -2.41
CCL1P22362 RMST_2.1-201ENST00000617263 136 ntBASIC0.02□□□□□ -2.41
CCL1P22362 AF246928.1-201ENST00000623768 87 ntBASIC0.02□□□□□ -2.41
CCL1P22362 RNU6-553P-201ENST00000364047 96 ntBASIC0.01□□□□□ -2.41
CCL1P22362 Y_RNA.201-201ENST00000364052 96 ntBASIC0.01□□□□□ -2.41
CCL1P22362 RNU6-407P-201ENST00000365280 104 ntBASIC0.01□□□□□ -2.41
CCL1P22362 RNU6-1304P-201ENST00000411374 106 ntBASIC0.01□□□□□ -2.41
CCL1P22362 AL392103.1-201ENST00000447000 198 ntBASIC0.01□□□□□ -2.41
CCL1P22362 ELOCP24-201ENST00000456370 334 ntBASIC0.01□□□□□ -2.41
CCL1P22362 RPS3AP17-201ENST00000472594 777 ntBASIC0.01□□□□□ -2.41
CCL1P22362 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.01□□□□□ -2.41
CCL1P22362 AC022523.2-201ENST00000561045 150 ntBASIC0.01□□□□□ -2.41
CCL1P22362 AC007684.1-201ENST00000609671 477 ntBASIC0.01□□□□□ -2.41
CCL1P22362 AL354950.2-201ENST00000617939 290 ntBASIC0.01□□□□□ -2.41
CCL1P22362 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.01□□□□□ -2.41
CCL1P22362 MIR4315-1-201ENST00000636800 73 ntBASIC0.01□□□□□ -2.41
CCL1P22362 MIR4315-2-201ENST00000640925 73 ntBASIC0.01□□□□□ -2.41
CCL1P22362 MIR103A1-201ENST00000362165 78 ntBASIC0□□□□□ -2.41
CCL1P22362 MIR18A-201ENST00000362310 71 ntBASIC0□□□□□ -2.41
CCL1P22362 SNORA27.1-201ENST00000362604 124 ntBASIC0□□□□□ -2.41
CCL1P22362 SNORD44.1-201ENST00000363202 61 ntBASIC0□□□□□ -2.41
CCL1P22362 RNA5SP62-201ENST00000363457 110 ntBASIC0□□□□□ -2.41
CCL1P22362 Y_RNA.159-201ENST00000363674 87 ntBASIC0□□□□□ -2.41
CCL1P22362 SNORA2B-201ENST00000384583 137 ntBASIC0□□□□□ -2.41
CCL1P22362 RNY3P10-201ENST00000384764 102 ntBASIC0□□□□□ -2.41
CCL1P22362 RNU6-613P-201ENST00000410412 108 ntBASIC0□□□□□ -2.41
CCL1P22362 SNORD71-201ENST00000411292 86 ntBASIC0□□□□□ -2.41
CCL1P22362 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0□□□□□ -2.41
CCL1P22362 PIGPP3-201ENST00000425307 415 ntBASIC0□□□□□ -2.41
CCL1P22362 AC005534.2-201ENST00000431047 433 ntBASIC0□□□□□ -2.41
CCL1P22362 SNRPGP12-201ENST00000449481 213 ntBASIC0□□□□□ -2.41
CCL1P22362 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0□□□□□ -2.41
CCL1P22362 MTCO3P10-201ENST00000455912 772 ntBASIC0□□□□□ -2.41
CCL1P22362 AC114811.1-201ENST00000507207 168 ntBASIC0□□□□□ -2.41
CCL1P22362 RNU6-107P-201ENST00000516643 102 ntBASIC0□□□□□ -2.41
CCL1P22362 AC023442.1-201ENST00000531247 422 ntBASIC0□□□□□ -2.41
CCL1P22362 AL162730.1-201ENST00000605734 292 ntBASIC0□□□□□ -2.41
CCL1P22362 AC009248.2-201ENST00000619826 254 ntBASIC0□□□□□ -2.41
CCL1P22362 RNU4-21P-201ENST00000362802 126 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 AC117470.1-201ENST00000381974 330 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 MIR1295A-201ENST00000408463 79 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCL1P22362 Z82188.1-201ENST00000436709 154 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCL1P22362 AL137792.2-201ENST00000443484 235 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 AC091885.1-201ENST00000506658 268 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCL1P22362 MTND2P38-201ENST00000522536 667 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 EIF1P4-201ENST00000572664 335 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 SNORA4-201ENST00000584302 138 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 AL121757.2-201ENST00000611223 313 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 AL355073.2-201ENST00000612106 557 ntBASIC-0.01□□□□□ -2.41
CCL1P22362 SNORD68-201ENST00000363214 84 ntBASIC-0.02□□□□□ -2.41
CCL1P22362 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.02□□□□□ -2.41
CCL1P22362 U8.5-201ENST00000364528 136 ntBASIC-0.02□□□□□ -2.41
CCL1P22362 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.02□□□□□ -2.41
CCL1P22362 MIR518A1-201ENST00000385068 85 ntBASIC-0.02□□□□□ -2.41
CCL1P22362 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.02□□□□□ -2.41
CCL1P22362 RNU7-125P-201ENST00000458760 62 ntBASIC-0.02□□□□□ -2.41
CCL1P22362 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.02□□□□□ -2.41
CCL1P22362 AC018710.1-201ENST00000506509 158 ntBASIC-0.02□□□□□ -2.41
CCL1P22362 RNU6-863P-201ENST00000515989 104 ntBASIC-0.02□□□□□ -2.41
CCL1P22362 SNORA25.12-201ENST00000516202 82 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms