Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC078809.1-201ENST00000427601 140 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 RNU6-58P-201ENST00000517143 103 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 MIR4666A-201ENST00000580160 79 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 MIR3146-201ENST00000580367 79 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 MIR6507-201ENST00000613630 70 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 AL359547.2-201ENST00000615810 418 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 AC253576.2-201ENST00000618815 580 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 RNU6-873P-201ENST00000363833 107 ntBASIC-1.43□□□□□ -2.64
HMGA1P17096 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.43□□□□□ -2.64
HMGA1P17096 SCARNA18B-201ENST00000458806 135 ntBASIC-1.43□□□□□ -2.64
HMGA1P17096 AL049829.1-201ENST00000465411 156 ntBASIC-1.43□□□□□ -2.64
HMGA1P17096 RPL23AP75-201ENST00000491601 451 ntBASIC-1.43□□□□□ -2.64
HMGA1P17096 AC025647.1-201ENST00000517879 253 ntBASIC-1.43□□□□□ -2.64
HMGA1P17096 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.43□□□□□ -2.64
HMGA1P17096 MIR101-2-201ENST00000362195 79 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 SNORA67.2-201ENST00000384300 149 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 MIR15B-201ENST00000385045 98 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 RNA5SP482-201ENST00000391269 118 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 RNU6-293P-201ENST00000411259 106 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 RNU7-156P-201ENST00000517214 74 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.44□□□□□ -2.64
HMGA1P17096 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.44□□□□□ -2.64
HMGA1P17096 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.44□□□□□ -2.64
HMGA1P17096 AC138749.4-201ENST00000563970 127 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 AC140658.3-201ENST00000567603 271 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 AL596327.1-201ENST00000603629 213 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 SNORA70.25-201ENST00000612741 95 ntBASIC-1.44□□□□□ -2.64
HMGA1P17096 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.45□□□□□ -2.64
HMGA1P17096 MT-TN-201ENST00000387400 73 ntBASIC-1.45□□□□□ -2.64
HMGA1P17096 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.45□□□□□ -2.64
HMGA1P17096 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.45□□□□□ -2.64
HMGA1P17096 AC010486.2-201ENST00000505572 483 ntBASIC-1.45□□□□□ -2.64
HMGA1P17096 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.45□□□□□ -2.64
HMGA1P17096 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.45□□□□□ -2.64
HMGA1P17096 AC087894.1-201ENST00000538359 518 ntBASIC-1.45□□□□□ -2.64
HMGA1P17096 MIR5006-201ENST00000583027 110 ntBASIC-1.45□□□□□ -2.64
HMGA1P17096 MIR4677-201ENST00000584153 80 ntBASIC-1.45□□□□□ -2.64
HMGA1P17096 SNORA1B-201ENST00000362535 133 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 RNU6-289P-201ENST00000364093 107 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 MIR562-201ENST00000384894 95 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 RNU6-278P-201ENST00000390945 109 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 MTCO3P40-201ENST00000392516 676 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 MIR1285-2-201ENST00000408311 88 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 MTCO1P17-201ENST00000411522 491 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.46□□□□□ -2.64
HMGA1P17096 AC091951.3-201ENST00000504093 246 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.46□□□□□ -2.64
HMGA1P17096 AC005178.1-201ENST00000508392 440 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 AC174048.1-201ENST00000603389 144 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 AC016597.2-201ENST00000613256 341 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 AL139418.1-201ENST00000613613 177 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 AC005520.5-201ENST00000613926 164 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 U6.73-201ENST00000619194 103 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 AC138649.3-201ENST00000622154 254 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 AC093726.3-201ENST00000637588 150 ntBASIC-1.46□□□□□ -2.64
HMGA1P17096 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 RNU6-47P-201ENST00000383866 107 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 AC114491.1-201ENST00000416095 246 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 USP9YP21-201ENST00000420603 432 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 RNU6-123P-201ENST00000516163 102 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 MIR378D2-201ENST00000580636 98 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 AP000753.3-201ENST00000604083 169 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 AC099654.8-201ENST00000637757 681 ntBASIC-1.47□□□□□ -2.64
HMGA1P17096 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.48□□□□□ -2.65
HMGA1P17096 MIR215-201ENST00000384858 110 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 MIR125B2-201ENST00000385128 89 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 RNU2-54P-201ENST00000410299 190 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 AL390729.2-201ENST00000416137 156 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 MTND2P6-201ENST00000455337 1030 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.48□□□□□ -2.65
HMGA1P17096 RNU6-135P-201ENST00000516769 101 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 RNA5SP454-201ENST00000517231 127 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 AC026421.1-201ENST00000519101 163 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 AC006600.1-201ENST00000572529 153 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 MIR548AC-201ENST00000585049 88 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 AC144521.1-201ENST00000607148 956 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 MIR7844-201ENST00000616161 122 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.48□□□□□ -2.65
HMGA1P17096 MIR365A-201ENST00000362260 87 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 SNORD56.4-201ENST00000363883 71 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 U8.6-201ENST00000364939 135 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 MIR578-201ENST00000384828 96 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 AL117339.3-201ENST00000418733 162 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.49□□□□□ -2.65
HMGA1P17096 MTND1P26-201ENST00000440488 538 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 MTND2P20-201ENST00000440805 661 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 AC004386.2-201ENST00000441858 148 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 AL360271.2-201ENST00000447710 161 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 AC105417.1-201ENST00000514691 285 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 RNU6-150P-201ENST00000516237 95 ntBASIC-1.49□□□□□ -2.65
HMGA1P17096 SNORA18.4-201ENST00000516440 124 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms