Protein–RNA interactions for Protein: P12018

VPREB1, Immunoglobulin iota chain, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1P12018 SNORA48.7-201ENST00000391302 135 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 RNA5SP511-201ENST00000410487 115 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.55□□□□□ -2.16
VPREB1P12018 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.55□□□□□ -2.16
VPREB1P12018 SNORD109B-201ENST00000458961 67 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 SNORD109A-201ENST00000459128 67 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 AC010655.3-201ENST00000478818 450 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 SNORA70.12-201ENST00000516084 153 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 RNU6-1046P-201ENST00000516538 107 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 RNU2-56P-201ENST00000516826 190 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 RNU7-110P-201ENST00000516891 62 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.55□□□□□ -2.16
VPREB1P12018 AC015720.1-201ENST00000565251 277 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 AC136932.1-201ENST00000574771 208 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 MIR3171-201ENST00000584270 74 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.55□□□□□ -2.16
VPREB1P12018 ELOCP29-201ENST00000588193 334 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 AC124312.5-201ENST00000604451 268 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 RAC1P9-201ENST00000604990 392 ntBASIC1.55□□□□□ -2.16
VPREB1P12018 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.55□□□□□ -2.16
VPREB1P12018 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPREB1P12018 SNORD81.1-201ENST00000363064 77 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 Y_RNA.462-201ENST00000384268 102 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 Y_RNA.551-201ENST00000384661 102 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 RNU6-823P-201ENST00000391042 103 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 RNU5A-5P-201ENST00000411054 116 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 AC079804.2-201ENST00000490376 200 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 RNA5SP320-201ENST00000516263 124 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 RNU6-1153P-201ENST00000516760 105 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 RNU6-341P-201ENST00000516973 96 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 Y_RNA.715-201ENST00000517082 110 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 RNU6-988P-201ENST00000519081 107 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 MIR3145-201ENST00000580727 82 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 DEFB117-201ENST00000602356 141 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 AC005000.2-201ENST00000605468 310 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 AC011373.1-201ENST00000607270 237 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 AC040896.1-201ENST00000613819 479 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 AL137790.1-201ENST00000634283 177 ntBASIC1.54□□□□□ -2.16
VPREB1P12018 MIR513A1-201ENST00000385138 129 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC092017.2-201ENST00000427600 362 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.53□□□□□ -2.16
VPREB1P12018 PGBD4P5-201ENST00000445958 426 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 RPS4XP11-201ENST00000446897 772 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC233266.1-201ENST00000454518 96 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.53□□□□□ -2.16
VPREB1P12018 AL163540.1-201ENST00000485382 386 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.53□□□□□ -2.16
VPREB1P12018 Y_RNA.701-201ENST00000516812 110 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.53□□□□□ -2.16
VPREB1P12018 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.53□□□□□ -2.16
VPREB1P12018 AC004832.4-201ENST00000608952 331 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC242852.1-201ENST00000612151 96 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC244015.1-201ENST00000622301 99 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 CTSLP2-204ENST00000629029 392 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 AC016717.2-201ENST00000609089 5141 ntBASIC1.53□□□□□ -2.16
VPREB1P12018 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPREB1P12018 MIRLET7G-201ENST00000362280 84 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 MIR518C-201ENST00000384822 101 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 MIR520G-201ENST00000385064 90 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 AL034345.1-201ENST00000407768 123 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 RNU2-52P-201ENST00000410680 190 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 AL445685.2-201ENST00000422551 342 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.52□□□□□ -2.17
VPREB1P12018 HSPE1P13-201ENST00000451143 297 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 AC022616.4-201ENST00000522985 181 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.52□□□□□ -2.17
VPREB1P12018 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.52□□□□□ -2.17
VPREB1P12018 MIR1291-201ENST00000627649 87 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 IGHVIII-44-202ENST00000636235 289 ntBASIC1.52□□□□□ -2.17
VPREB1P12018 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.52□□□□□ -2.17
VPREB1P12018 AC005336.3-201ENST00000623833 2679 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 RNU6-1123P-201ENST00000362347 106 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 Y_RNA.265-201ENST00000364677 108 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 Y_RNA.286-201ENST00000364813 102 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 Y_RNA.389-201ENST00000383924 113 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 RNU11-5P-201ENST00000391216 129 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 AL590004.1-201ENST00000405321 300 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 CALM2P4-201ENST00000430810 426 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 AL162725.1-201ENST00000435405 301 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.51□□□□□ -2.17
VPREB1P12018 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.51□□□□□ -2.17
VPREB1P12018 Y_RNA.713-201ENST00000517013 96 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 SUMO2P16-201ENST00000519475 264 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
VPREB1P12018 MIR1254-2-201ENST00000579553 63 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 MIR4300-201ENST00000581016 96 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.51□□□□□ -2.17
VPREB1P12018 AL356055.1-201ENST00000602528 446 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
VPREB1P12018 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPREB1P12018 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.5□□□□□ -2.17
VPREB1P12018 SNORD46.1-201ENST00000364139 104 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms