Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.43□□□□□ -2.18
VIMP08670 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.43□□□□□ -2.18
VIMP08670 AC105758.1-201ENST00000506038 399 ntBASIC1.43□□□□□ -2.18
VIMP08670 RNU6-470P-201ENST00000515954 104 ntBASIC1.43□□□□□ -2.18
VIMP08670 RNA5SP20-201ENST00000515976 84 ntBASIC1.43□□□□□ -2.18
VIMP08670 SUMO2P16-201ENST00000519475 264 ntBASIC1.43□□□□□ -2.18
VIMP08670 MIR3684-201ENST00000579779 74 ntBASIC1.43□□□□□ -2.18
VIMP08670 AC005730.3-201ENST00000583067 366 ntBASIC1.43□□□□□ -2.18
VIMP08670 AL021879.1-201ENST00000611756 288 ntBASIC1.43□□□□□ -2.18
VIMP08670 AL078604.3-201ENST00000615580 211 ntBASIC1.43□□□□□ -2.18
VIMP08670 U6.115-201ENST00000636045 103 ntBASIC1.43□□□□□ -2.18
VIMP08670 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VIMP08670 SNORA27.1-201ENST00000362604 124 ntBASIC1.42□□□□□ -2.18
VIMP08670 Y_RNA.592-201ENST00000410274 109 ntBASIC1.42□□□□□ -2.18
VIMP08670 MTND4P28-201ENST00000426217 387 ntBASIC1.42□□□□□ -2.18
VIMP08670 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.42□□□□□ -2.18
VIMP08670 AC007677.1-201ENST00000445757 515 ntBASIC1.42□□□□□ -2.18
VIMP08670 Y_RNA.653-201ENST00000459091 95 ntBASIC1.42□□□□□ -2.18
VIMP08670 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.42□□□□□ -2.18
VIMP08670 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
VIMP08670 MIR6079-201ENST00000635807 62 ntBASIC1.42□□□□□ -2.18
VIMP08670 MTND4LP32-201ENST00000636111 270 ntBASIC1.42□□□□□ -2.18
VIMP08670 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
VIMP08670 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.41□□□□□ -2.18
VIMP08670 RNU6-1297P-201ENST00000384415 104 ntBASIC1.41□□□□□ -2.18
VIMP08670 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
VIMP08670 AC015922.2-201ENST00000435593 184 ntBASIC1.41□□□□□ -2.18
VIMP08670 RNU7-169P-201ENST00000459456 61 ntBASIC1.41□□□□□ -2.18
VIMP08670 MIR3683-201ENST00000580847 82 ntBASIC1.41□□□□□ -2.18
VIMP08670 RNY3P11-201ENST00000364153 102 ntBASIC1.4□□□□□ -2.19
VIMP08670 RNU6-1065P-201ENST00000384513 106 ntBASIC1.4□□□□□ -2.19
VIMP08670 SNORA67.5-201ENST00000391036 107 ntBASIC1.4□□□□□ -2.19
VIMP08670 AL627390.1-201ENST00000396055 340 ntBASIC1.4□□□□□ -2.19
VIMP08670 AL034345.1-201ENST00000407768 123 ntBASIC1.4□□□□□ -2.19
VIMP08670 MRPS18CP6-201ENST00000423587 223 ntBASIC1.4□□□□□ -2.19
VIMP08670 SNX2P2-201ENST00000424553 323 ntBASIC1.4□□□□□ -2.19
VIMP08670 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.4□□□□□ -2.19
VIMP08670 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
VIMP08670 PGBD4P5-201ENST00000445958 426 ntBASIC1.4□□□□□ -2.19
VIMP08670 RNU6-408P-201ENST00000515910 100 ntBASIC1.4□□□□□ -2.19
VIMP08670 RNU6-277P-201ENST00000516272 106 ntBASIC1.4□□□□□ -2.19
VIMP08670 RNU7-4P-201ENST00000516961 62 ntBASIC1.4□□□□□ -2.19
VIMP08670 RPL21P9-201ENST00000556149 474 ntBASIC1.4□□□□□ -2.19
VIMP08670 UBE2V2P2-201ENST00000587677 504 ntBASIC1.4□□□□□ -2.19
VIMP08670 MIR6845-201ENST00000613182 61 ntBASIC1.4□□□□□ -2.19
VIMP08670 Y_RNA.124-201ENST00000363339 93 ntBASIC1.39□□□□□ -2.19
VIMP08670 SNORA72.1-201ENST00000363485 129 ntBASIC1.39□□□□□ -2.19
VIMP08670 Y_RNA.387-201ENST00000383918 102 ntBASIC1.39□□□□□ -2.19
VIMP08670 RNU6-926P-201ENST00000384075 107 ntBASIC1.39□□□□□ -2.19
VIMP08670 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.39□□□□□ -2.19
VIMP08670 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.39□□□□□ -2.19
VIMP08670 STAG3L5P-204ENST00000443759 179 ntBASIC1.39□□□□□ -2.19
VIMP08670 SNORA59A-201ENST00000459326 152 ntBASIC1.39□□□□□ -2.19
VIMP08670 AC091021.1-201ENST00000468051 388 ntBASIC1.39□□□□□ -2.19
VIMP08670 AC144568.1-201ENST00000520139 137 ntBASIC1.39□□□□□ -2.19
VIMP08670 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.39□□□□□ -2.19
VIMP08670 AC133104.2-201ENST00000615272 193 ntBASIC1.39□□□□□ -2.19
VIMP08670 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.39□□□□□ -2.19
VIMP08670 MIR7843-201ENST00000622274 79 ntBASIC1.39□□□□□ -2.19
VIMP08670 RNU6-961P-201ENST00000363893 105 ntBASIC1.38□□□□□ -2.19
VIMP08670 Y_RNA.259-201ENST00000364619 101 ntBASIC1.38□□□□□ -2.19
VIMP08670 SNORD116-29-201ENST00000384516 83 ntBASIC1.38□□□□□ -2.19
VIMP08670 RNU6-376P-201ENST00000384731 106 ntBASIC1.38□□□□□ -2.19
VIMP08670 MIR504-201ENST00000385065 83 ntBASIC1.38□□□□□ -2.19
VIMP08670 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
VIMP08670 MIR873-201ENST00000401120 77 ntBASIC1.38□□□□□ -2.19
VIMP08670 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.38□□□□□ -2.19
VIMP08670 AL137792.2-201ENST00000443484 235 ntBASIC1.38□□□□□ -2.19
VIMP08670 AL162424.1-201ENST00000602325 221 ntBASIC1.38□□□□□ -2.19
VIMP08670 AC005828.6-201ENST00000606610 232 ntBASIC1.38□□□□□ -2.19
VIMP08670 AC025253.1-201ENST00000613623 543 ntBASIC1.38□□□□□ -2.19
VIMP08670 MIR1302-1-201ENST00000637932 143 ntBASIC1.38□□□□□ -2.19
VIMP08670 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
VIMP08670 Y_RNA.267-201ENST00000364679 109 ntBASIC1.37□□□□□ -2.19
VIMP08670 Y_RNA.303-201ENST00000364998 94 ntBASIC1.37□□□□□ -2.19
VIMP08670 Y_RNA.314-201ENST00000365114 102 ntBASIC1.37□□□□□ -2.19
VIMP08670 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.37□□□□□ -2.19
VIMP08670 RNU6-1310P-201ENST00000384153 107 ntBASIC1.37□□□□□ -2.19
VIMP08670 RNU11-5P-201ENST00000391216 129 ntBASIC1.37□□□□□ -2.19
VIMP08670 Y_RNA.605-201ENST00000410577 105 ntBASIC1.37□□□□□ -2.19
VIMP08670 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.37□□□□□ -2.19
VIMP08670 ELOCP24-201ENST00000456370 334 ntBASIC1.37□□□□□ -2.19
VIMP08670 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.37□□□□□ -2.19
VIMP08670 AC023442.1-201ENST00000531247 422 ntBASIC1.37□□□□□ -2.19
VIMP08670 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.37□□□□□ -2.19
VIMP08670 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.37□□□□□ -2.19
VIMP08670 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
VIMP08670 CYP3A52P-201ENST00000563326 91 ntBASIC1.37□□□□□ -2.19
VIMP08670 AC055872.1-201ENST00000570978 278 ntBASIC1.37□□□□□ -2.19
VIMP08670 AC091178.2-201ENST00000584401 117 ntBASIC1.37□□□□□ -2.19
VIMP08670 AL132765.2-201ENST00000610812 351 ntBASIC1.37□□□□□ -2.19
VIMP08670 AC004467.1-201ENST00000615678 330 ntBASIC1.37□□□□□ -2.19
VIMP08670 AC073349.3-201ENST00000617616 186 ntBASIC1.37□□□□□ -2.19
VIMP08670 AL513423.1-201ENST00000621695 132 ntBASIC1.37□□□□□ -2.19
VIMP08670 AC127459.3-201ENST00000624328 466 ntBASIC1.37□□□□□ -2.19
VIMP08670 SNORD3E-202ENST00000627253 216 ntBASIC1.37□□□□□ -2.19
VIMP08670 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.37□□□□□ -2.19
VIMP08670 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
VIMP08670 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VIMP08670 U8.1-201ENST00000362843 134 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms