Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AF235103.2-201ENST00000525753 346 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
HLA-DQB2P05538 MIR3915-201ENST00000578518 97 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 AC100830.2-201ENST00000581636 240 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 AC010620.1-201ENST00000601088 1102 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 AL133215.3-201ENST00000609801 448 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 AL354950.2-201ENST00000617939 290 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 AC072046.2-201ENST00000618366 268 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 AC007494.3-201ENST00000624660 743 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
HLA-DQB2P05538 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
HLA-DQB2P05538 Y_RNA.184-201ENST00000363884 108 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 RNU4-41P-201ENST00000364426 143 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 Y_RNA.381-201ENST00000365666 102 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 SNORA20B-201ENST00000384220 132 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 MIR489-201ENST00000384923 84 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 MIR153-2-201ENST00000385225 87 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 RNU6-159P-201ENST00000391080 106 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.16□□□□□ -2.38
HLA-DQB2P05538 PIGPP3-201ENST00000425307 415 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 MTCO1P20-201ENST00000425366 358 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.16□□□□□ -2.38
HLA-DQB2P05538 RNU7-41P-201ENST00000515917 61 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.16□□□□□ -2.38
HLA-DQB2P05538 AC023442.1-201ENST00000531247 422 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 MIR4300-201ENST00000581016 96 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 AC007684.1-201ENST00000609671 477 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 AL158063.1-201ENST00000615349 536 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 AC027279.3-201ENST00000625055 122 ntBASIC0.16□□□□□ -2.38
HLA-DQB2P05538 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.15□□□□□ -2.38
HLA-DQB2P05538 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 Y_RNA.378-201ENST00000365652 113 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 RNU6-376P-201ENST00000384731 106 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.15□□□□□ -2.39
HLA-DQB2P05538 CYCTP-201ENST00000504253 315 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AC093303.1-201ENST00000514549 295 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 SNORA19.2-201ENST00000516013 114 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 RNU6-107P-201ENST00000516643 102 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 MTCO2P4-201ENST00000517968 247 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AL358944.1-201ENST00000528537 144 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 UBL5P4-201ENST00000562584 236 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AC120024.3-201ENST00000603167 156 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 FAM157A-202ENST00000615155 405 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AC007742.2-201ENST00000618226 398 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AC006504.8-201ENST00000621046 635 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 AC073544.1-201ENST00000600110 1595 ntBASIC0.15□□□□□ -2.39
HLA-DQB2P05538 Y_RNA.118-201ENST00000363300 101 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 RNU6-407P-201ENST00000365280 104 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 RNU6-214P-201ENST00000384130 107 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 RNU5A-2P-201ENST00000384337 116 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 RNU6-541P-201ENST00000384709 110 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 MIR520C-201ENST00000385005 87 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 MIR452-201ENST00000385020 85 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 MT-TH-201ENST00000387441 69 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 SNORD37.1-201ENST00000390968 65 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.14□□□□□ -2.39
HLA-DQB2P05538 RPL30P16-201ENST00000419341 429 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.14□□□□□ -2.39
HLA-DQB2P05538 AC018710.1-201ENST00000506509 158 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 AC091885.1-201ENST00000506658 268 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 PIGPP4-201ENST00000584447 307 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 AC109347.2-201ENST00000610220 349 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 AC009248.2-201ENST00000619826 254 ntBASIC0.14□□□□□ -2.39
HLA-DQB2P05538 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
HLA-DQB2P05538 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 Y_RNA.167-201ENST00000363735 109 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 SNORD113-7-201ENST00000363762 77 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 RNU6-38P-201ENST00000384085 107 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 RNU5A-6P-201ENST00000384136 116 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 AC018865.2-201ENST00000423631 129 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 Y_RNA.654-201ENST00000497848 106 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 RNU6-1332P-201ENST00000516666 104 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 RNU11-2P-201ENST00000516898 142 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 SNORA74.3-201ENST00000517108 154 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.13□□□□□ -2.39
HLA-DQB2P05538 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 AC008133.2-201ENST00000624540 351 ntBASIC0.13□□□□□ -2.39
HLA-DQB2P05538 RNU5F-3P-201ENST00000363767 117 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 Y_RNA.179-201ENST00000363844 90 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 RNU6-280P-201ENST00000364145 104 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 SNORD113.3-201ENST00000364630 78 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.12□□□□□ -2.39
HLA-DQB2P05538 MIR516B2-201ENST00000385190 85 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 SNORA26.8-201ENST00000391306 124 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 AL353193.1-201ENST00000421444 268 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 MTCO2P19-201ENST00000427513 598 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 AL392103.1-201ENST00000447000 198 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 RPL30P10-201ENST00000488148 337 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 RNA5SP20-201ENST00000515976 84 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 RN7SL793P-201ENST00000583259 296 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 AL136370.1-201ENST00000608166 691 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 AC010999.1-201ENST00000611856 324 ntBASIC0.12□□□□□ -2.39
HLA-DQB2P05538 MIR103A1-201ENST00000362165 78 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 SNORA27.1-201ENST00000362604 124 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms