Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PCNPP5-201ENST00000452246 481 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 SNORD5.1-201ENST00000458800 75 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 HMGN1P10-201ENST00000474557 553 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A1P02462 RPL30P7-201ENST00000479312 323 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 TRBVA-201ENST00000498804 316 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 RNU6-1281P-201ENST00000516223 105 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.57□□□□□ -2.32
COL4A1P02462 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.57□□□□□ -2.32
COL4A1P02462 MIR4514-201ENST00000581410 57 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 MIR4653-201ENST00000585107 83 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 U6.73-201ENST00000619194 103 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 RNU6-873P-201ENST00000363833 107 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 SNORD87-201ENST00000364849 89 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 Y_RNA.554-201ENST00000384672 102 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 RNA5SP323-201ENST00000391094 133 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A1P02462 TOMM22P2-201ENST00000430735 237 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AC079354.2-201ENST00000453523 154 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 ACA59.1-201ENST00000515966 143 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AL590705.4-201ENST00000532209 134 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 MIR5589-201ENST00000579442 60 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AL929325.1-201ENST00000603096 117 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AL138726.1-201ENST00000614873 333 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AL078596.1-201ENST00000624856 447 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 RNU6-727P-201ENST00000363592 107 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 RNY4P14-201ENST00000363656 96 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 RNU1-36P-201ENST00000365130 165 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 SNORA4.2-201ENST00000365313 147 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 RNU6-596P-201ENST00000365395 98 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 RNU6-968P-201ENST00000384076 107 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 RNU6-439P-201ENST00000384188 106 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 RNU6-1145P-201ENST00000384246 107 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
COL4A1P02462 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.56□□□□□ -2.32
COL4A1P02462 RPL30P16-201ENST00000419341 429 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 SNX2P2-201ENST00000424553 323 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 HMGN2P34-201ENST00000437647 269 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A1P02462 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A1P02462 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A1P02462 RNU7-99P-201ENST00000516271 62 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 SNORA62.5-201ENST00000516634 120 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AK6P2-201ENST00000549020 471 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A1P02462 MIR4709-201ENST00000577272 72 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AC091178.2-201ENST00000584401 117 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AL162424.1-201ENST00000602325 221 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AC124303.1-201ENST00000605703 360 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AC021506.2-201ENST00000612354 169 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 FAM157A-202ENST00000615155 405 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 AC007014.2-201ENST00000615581 479 ntBASIC0.56□□□□□ -2.32
COL4A1P02462 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A1P02462 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.56□□□□□ -2.32
COL4A1P02462 Y_RNA.100-201ENST00000363141 102 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 Y_RNA.530-201ENST00000384587 101 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 Y_RNA.533-201ENST00000384596 114 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 RNU6-331P-201ENST00000384724 107 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 MIR514A2-201ENST00000385131 88 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 MIR514A3-201ENST00000385132 88 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 MIR153-2-201ENST00000385225 87 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 RNU6-510P-201ENST00000391239 108 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 AL590632.1-201ENST00000424289 371 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 USMG5P1-201ENST00000425964 177 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 Z98949.2-201ENST00000440996 144 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 MTND4P18-201ENST00000447010 465 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.55□□□□□ -2.32
COL4A1P02462 RNU7-66P-201ENST00000459469 62 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 RNU6-329P-201ENST00000459618 107 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 RPL30P10-201ENST00000488148 337 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 SNORD116-28-201ENST00000516123 91 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 Y_RNA.665-201ENST00000516177 98 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 AC026470.2-201ENST00000561492 181 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 CYP3A52P-201ENST00000563326 91 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 FRG2DP-202ENST00000566967 323 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 MIR3664-201ENST00000579074 99 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 AC022217.4-201ENST00000604389 163 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 AL359075.3-201ENST00000613288 217 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 AC006001.4-201ENST00000622243 395 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.55□□□□□ -2.32
COL4A1P02462 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
COL4A1P02462 MTND5P16-201ENST00000460269 1703 ntBASIC0.55□□□□□ -2.32
COL4A1P02462 MIR302D-201ENST00000362275 68 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 Y_RNA.9-201ENST00000362354 101 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 Y_RNA.136-201ENST00000363444 102 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 RNU6-1090P-201ENST00000364065 94 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 SNORD115-32-201ENST00000364079 82 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 Y_RNA.212-201ENST00000364177 102 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 RNU6-1013P-201ENST00000384180 107 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 Y_RNA.453-201ENST00000384223 109 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 RNA5SP475-201ENST00000410568 110 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 ELOCP21-201ENST00000412558 336 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 AC243428.1-201ENST00000421099 264 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.54□□□□□ -2.32
COL4A1P02462 DYNLT3P2-201ENST00000442517 295 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 AC074290.1-201ENST00000448883 135 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.54□□□□□ -2.32
COL4A1P02462 AC010469.2-201ENST00000496412 480 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms