Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 U8.21-201ENST00000459536 136 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 RPS29P27-201ENST00000463711 170 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA1O95477 RNU7-43P-201ENST00000516554 64 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA1O95477 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.29□□□□□ -2.46
ABCA1O95477 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA1O95477 MTND3P19-201ENST00000603825 345 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 AL121992.2-201ENST00000606262 256 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 RNU6-227P-201ENST00000362865 103 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 SNORA36A-201ENST00000384221 132 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 MIR593-201ENST00000384856 100 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 RNU2-59P-201ENST00000410482 191 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA1O95477 USP9YP29-201ENST00000445112 563 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 RPS29P15-201ENST00000458329 171 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 RNU6-138P-201ENST00000515952 107 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 AP000811.1-201ENST00000603803 651 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 AP000907.4-201ENST00000604143 237 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 AC137590.2-201ENST00000619709 240 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 AL049777.1-201ENST00000622740 518 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU4-46P-201ENST00000410818 138 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AC004386.2-201ENST00000441858 148 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU6-58P-201ENST00000517143 103 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AP003181.2-201ENST00000528941 181 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 MIR4264-201ENST00000583520 66 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU6-679P-201ENST00000391003 106 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 MRPL42P2-201ENST00000403169 426 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 SNORD75.1-201ENST00000408373 60 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 MIR320B2-201ENST00000408479 138 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AL590632.1-201ENST00000424289 371 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AC119618.1-201ENST00000434191 222 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AC079781.2-201ENST00000446424 169 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AL031274.1-201ENST00000450334 232 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AC107401.1-201ENST00000503426 685 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU6-848P-201ENST00000515948 107 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU6-617P-201ENST00000516147 107 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU6-473P-201ENST00000516164 107 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNA5SP94-201ENST00000516917 108 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AK6P2-201ENST00000549020 471 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 HIF1AP1-201ENST00000553642 175 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 MIR548AO-201ENST00000579992 96 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AC234772.3-201ENST00000602277 528 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 AL591926.4-201ENST00000616895 298 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 MIR198-201ENST00000637333 62 ntBASIC-0.3□□□□□ -2.46
ABCA1O95477 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 SNORD114-3-201ENST00000364969 75 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 SNORA24.1-201ENST00000384401 135 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 MT-TQ-201ENST00000387372 72 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 RNA5SP300-201ENST00000391197 107 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.31□□□□□ -2.46
ABCA1O95477 MTCYBP4-201ENST00000401524 249 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 AL512326.2-201ENST00000426359 151 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.31□□□□□ -2.46
ABCA1O95477 RNU4-49P-201ENST00000516080 140 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 RN7SL660P-201ENST00000614852 299 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 AC005562.2-201ENST00000618264 111 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 U6.114-201ENST00000636407 96 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 SNORA18.1-201ENST00000363418 128 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 SNORD114-12-201ENST00000365400 75 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 MIR1207-201ENST00000408249 87 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 SNORD100-201ENST00000408573 76 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 MIR1185-2-201ENST00000408687 86 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 PIGPP3-201ENST00000425307 415 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 AL353997.1-201ENST00000432936 108 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 GPR143P-201ENST00000434155 205 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.31□□□□□ -2.46
ABCA1O95477 SNORD27.1-201ENST00000516319 72 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 AC022616.6-201ENST00000520479 119 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 MIR4300-201ENST00000581016 96 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 AL359999.1-201ENST00000604513 294 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 AC002044.1-201ENST00000606707 158 ntBASIC-0.31□□□□□ -2.46
ABCA1O95477 RNU6-413P-201ENST00000384115 107 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 MIR15B-201ENST00000385045 98 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 RNU4-30P-201ENST00000410245 143 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.32□□□□□ -2.46
ABCA1O95477 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.32□□□□□ -2.46
ABCA1O95477 SNORD65B-201ENST00000459126 73 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 RNU6-410P-201ENST00000517006 107 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 RNU6-430P-201ENST00000517078 107 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 MTND2P38-201ENST00000522536 667 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 MTATP6P15-201ENST00000527233 835 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 RPL21P9-201ENST00000556149 474 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 AL355375.2-201ENST00000574825 175 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 BNIP3P39-201ENST00000601077 554 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 AC112487.2-201ENST00000637950 304 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 AC013437.2-201ENST00000639587 677 ntBASIC-0.32□□□□□ -2.46
ABCA1O95477 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.33□□□□□ -2.46
ABCA1O95477 RNU6-179P-201ENST00000363350 107 ntBASIC-0.33□□□□□ -2.46
ABCA1O95477 RNY1P12-201ENST00000364251 105 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms