Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SNORA75-201ENST00000384158 137 ntBASIC0.55□□□□□ -2.32
SNX4O95219 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
SNX4O95219 RPL30P16-201ENST00000419341 429 ntBASIC0.55□□□□□ -2.32
SNX4O95219 RNU6-1278P-201ENST00000516130 107 ntBASIC0.55□□□□□ -2.32
SNX4O95219 AC091144.1-201ENST00000519573 138 ntBASIC0.55□□□□□ -2.32
SNX4O95219 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.55□□□□□ -2.32
SNX4O95219 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
SNX4O95219 UBL5P4-201ENST00000562584 236 ntBASIC0.55□□□□□ -2.32
SNX4O95219 SEPT14P17-201ENST00000617978 177 ntBASIC0.55□□□□□ -2.32
SNX4O95219 AC097520.1-201ENST00000624435 385 ntBASIC0.55□□□□□ -2.32
SNX4O95219 RNU1-133P-201ENST00000364867 167 ntBASIC0.54□□□□□ -2.32
SNX4O95219 SNORA20B-201ENST00000384220 132 ntBASIC0.54□□□□□ -2.32
SNX4O95219 SNORD89-201ENST00000390981 114 ntBASIC0.54□□□□□ -2.32
SNX4O95219 SNORD99-201ENST00000408612 74 ntBASIC0.54□□□□□ -2.32
SNX4O95219 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.54□□□□□ -2.32
SNX4O95219 AC233266.1-201ENST00000454518 96 ntBASIC0.54□□□□□ -2.32
SNX4O95219 AP000870.1-201ENST00000472927 406 ntBASIC0.54□□□□□ -2.32
SNX4O95219 RNU6-1110P-201ENST00000516462 101 ntBASIC0.54□□□□□ -2.32
SNX4O95219 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.54□□□□□ -2.32
SNX4O95219 AC242852.1-201ENST00000612151 96 ntBASIC0.54□□□□□ -2.32
SNX4O95219 AC007014.2-201ENST00000615581 479 ntBASIC0.54□□□□□ -2.32
SNX4O95219 AC244015.1-201ENST00000622301 99 ntBASIC0.54□□□□□ -2.32
SNX4O95219 AC099654.12-201ENST00000639868 649 ntBASIC0.54□□□□□ -2.32
SNX4O95219 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
SNX4O95219 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
SNX4O95219 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SNX4O95219 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
SNX4O95219 RNU6-254P-201ENST00000363377 107 ntBASIC0.53□□□□□ -2.32
SNX4O95219 Y_RNA.231-201ENST00000364358 102 ntBASIC0.53□□□□□ -2.32
SNX4O95219 Y_RNA.336-201ENST00000365307 109 ntBASIC0.53□□□□□ -2.32
SNX4O95219 RPL23AP50-201ENST00000434149 455 ntBASIC0.53□□□□□ -2.32
SNX4O95219 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.53□□□□□ -2.32
SNX4O95219 RPL30P10-201ENST00000488148 337 ntBASIC0.53□□□□□ -2.32
SNX4O95219 AC107401.1-201ENST00000503426 685 ntBASIC0.53□□□□□ -2.32
SNX4O95219 RNU7-175P-201ENST00000515915 61 ntBASIC0.53□□□□□ -2.32
SNX4O95219 RNA5SP20-201ENST00000515976 84 ntBASIC0.53□□□□□ -2.32
SNX4O95219 Y_RNA.683-201ENST00000516508 93 ntBASIC0.53□□□□□ -2.32
SNX4O95219 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.53□□□□□ -2.32
SNX4O95219 LRRC34P1-201ENST00000542742 915 ntBASIC0.53□□□□□ -2.32
SNX4O95219 AC131055.1-201ENST00000584626 316 ntBASIC0.53□□□□□ -2.32
SNX4O95219 MIR3192-201ENST00000584920 77 ntBASIC0.53□□□□□ -2.32
SNX4O95219 AC027279.3-201ENST00000625055 122 ntBASIC0.53□□□□□ -2.32
SNX4O95219 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
SNX4O95219 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
SNX4O95219 MIR103A2-201ENST00000362154 78 ntBASIC0.52□□□□□ -2.33
SNX4O95219 MIR520G-201ENST00000385064 90 ntBASIC0.52□□□□□ -2.33
SNX4O95219 Y_RNA.582-201ENST00000391023 95 ntBASIC0.52□□□□□ -2.33
SNX4O95219 RNU6-648P-201ENST00000410190 107 ntBASIC0.52□□□□□ -2.33
SNX4O95219 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.52□□□□□ -2.33
SNX4O95219 AC092423.1-201ENST00000430165 186 ntBASIC0.52□□□□□ -2.33
SNX4O95219 MTCO1P19-201ENST00000443487 500 ntBASIC0.52□□□□□ -2.33
SNX4O95219 AC067940.1-201ENST00000458411 300 ntBASIC0.52□□□□□ -2.33
SNX4O95219 AC083904.1-201ENST00000487828 231 ntBASIC0.52□□□□□ -2.33
SNX4O95219 CYCTP-201ENST00000504253 315 ntBASIC0.52□□□□□ -2.33
SNX4O95219 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.52□□□□□ -2.33
SNX4O95219 AC145350.1-201ENST00000567426 208 ntBASIC0.52□□□□□ -2.33
SNX4O95219 AC093913.1-201ENST00000614178 329 ntBASIC0.52□□□□□ -2.33
SNX4O95219 MIR6515-201ENST00000619843 57 ntBASIC0.52□□□□□ -2.33
SNX4O95219 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
SNX4O95219 AL391262.2-201ENST00000622466 494 ntBASIC0.52□□□□□ -2.33
SNX4O95219 RNU6-522P-201ENST00000364497 107 ntBASIC0.51□□□□□ -2.33
SNX4O95219 RNU6-407P-201ENST00000365280 104 ntBASIC0.51□□□□□ -2.33
SNX4O95219 RNU6-1335P-201ENST00000365426 107 ntBASIC0.51□□□□□ -2.33
SNX4O95219 RNU6-1067P-201ENST00000384752 107 ntBASIC0.51□□□□□ -2.33
SNX4O95219 MIR526A1-201ENST00000384897 85 ntBASIC0.51□□□□□ -2.33
SNX4O95219 ERLEC1P1-201ENST00000433806 578 ntBASIC0.51□□□□□ -2.33
SNX4O95219 AL162725.1-201ENST00000435405 301 ntBASIC0.51□□□□□ -2.33
SNX4O95219 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
SNX4O95219 snoU13.25-201ENST00000458945 104 ntBASIC0.51□□□□□ -2.33
SNX4O95219 AC109810.1-201ENST00000534066 224 ntBASIC0.51□□□□□ -2.33
SNX4O95219 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.51□□□□□ -2.33
SNX4O95219 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.51□□□□□ -2.33
SNX4O95219 RNY1-201ENST00000364228 113 ntBASIC0.5□□□□□ -2.33
SNX4O95219 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SNX4O95219 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
SNX4O95219 MIR452-201ENST00000385020 85 ntBASIC0.5□□□□□ -2.33
SNX4O95219 AC018865.2-201ENST00000423631 129 ntBASIC0.5□□□□□ -2.33
SNX4O95219 AC092447.3-201ENST00000426027 686 ntBASIC0.5□□□□□ -2.33
SNX4O95219 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
SNX4O95219 RNU6-1291P-201ENST00000516591 104 ntBASIC0.5□□□□□ -2.33
SNX4O95219 RNU6-835P-201ENST00000516974 104 ntBASIC0.5□□□□□ -2.33
SNX4O95219 RNU6-89P-201ENST00000606519 100 ntBASIC0.5□□□□□ -2.33
SNX4O95219 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
SNX4O95219 SNORA27.1-201ENST00000362604 124 ntBASIC0.49□□□□□ -2.33
SNX4O95219 Y_RNA.118-201ENST00000363300 101 ntBASIC0.49□□□□□ -2.33
SNX4O95219 MIR517A-201ENST00000385001 87 ntBASIC0.49□□□□□ -2.33
SNX4O95219 ZNF885P-201ENST00000420174 1098 ntBASIC0.49□□□□□ -2.33
SNX4O95219 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.49□□□□□ -2.33
SNX4O95219 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.49□□□□□ -2.33
SNX4O95219 AC018710.1-201ENST00000506509 158 ntBASIC0.49□□□□□ -2.33
SNX4O95219 AC046134.1-201ENST00000514454 666 ntBASIC0.49□□□□□ -2.33
SNX4O95219 MTND4LP26-201ENST00000518144 282 ntBASIC0.49□□□□□ -2.33
SNX4O95219 AL158211.1-201ENST00000566763 763 ntBASIC0.49□□□□□ -2.33
SNX4O95219 AC023827.1-201ENST00000569247 97 ntBASIC0.49□□□□□ -2.33
SNX4O95219 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.49□□□□□ -2.33
SNX4O95219 AL512605.2-201ENST00000592972 256 ntBASIC0.49□□□□□ -2.33
SNX4O95219 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SNX4O95219 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
SNX4O95219 RNU6-1264P-201ENST00000383891 107 ntBASIC0.48□□□□□ -2.33
SNX4O95219 RNU6-95P-201ENST00000384697 107 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms