Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC099654.12-201ENST00000639868 649 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 U3.8-201ENST00000363675 217 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 SNORD115-8-201ENST00000363856 82 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 SNORD115-38-201ENST00000365037 82 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 RNU6-541P-201ENST00000384709 110 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 U8.16-201ENST00000391279 133 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 AF228730.1-201ENST00000397972 663 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 AC114737.2-201ENST00000421583 173 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 MTCO1P20-201ENST00000425366 358 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.68□□□□□ -2.3
NPHP4O75161 PCMTD1P1-201ENST00000455560 355 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 MTND1P11-201ENST00000456661 876 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 SNORD65B-201ENST00000459126 73 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 RPS27P22-201ENST00000478056 241 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 RPS26P48-201ENST00000491713 339 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 AL590705.4-201ENST00000532209 134 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 OSBPL9P5-201ENST00000542581 171 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.68□□□□□ -2.3
NPHP4O75161 AC022432.1-201ENST00000595739 310 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 AC078883.4-201ENST00000623218 367 ntBASIC0.68□□□□□ -2.3
NPHP4O75161 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.68□□□□□ -2.3
NPHP4O75161 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
NPHP4O75161 RNU6-1266P-201ENST00000362794 105 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 RNU6-199P-201ENST00000362954 107 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 Y_RNA.231-201ENST00000364358 102 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 RNU4-9P-201ENST00000364951 139 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 Y_RNA.615-201ENST00000410769 117 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 AC010469.2-201ENST00000496412 480 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.67□□□□□ -2.3
NPHP4O75161 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 ZNF519P2-201ENST00000557032 169 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.67□□□□□ -2.3
NPHP4O75161 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
NPHP4O75161 RNU6-969P-201ENST00000383900 105 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 SNORD116-8-201ENST00000384365 95 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 RNU6-95P-201ENST00000384697 107 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 MIR653-201ENST00000385279 96 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 CALM2P3-201ENST00000400429 449 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 MTND4P18-201ENST00000447010 465 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 PDCD5P2-201ENST00000507570 312 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 AC091144.1-201ENST00000519573 138 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.66□□□□□ -2.3
NPHP4O75161 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.66□□□□□ -2.3
NPHP4O75161 AL121579.1-201ENST00000555129 305 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 POLR3GP2-201ENST00000588366 668 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
NPHP4O75161 RNU6-1085P-201ENST00000363576 107 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 Y_RNA.265-201ENST00000364677 108 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 MIR153-2-201ENST00000385225 87 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 RNU6-780P-201ENST00000391030 104 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.65□□□□□ -2.3
NPHP4O75161 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.65□□□□□ -2.3
NPHP4O75161 ERLEC1P1-201ENST00000433806 578 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 AC104332.1-201ENST00000440471 797 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 AC107401.1-201ENST00000503426 685 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 RNU6-107P-201ENST00000516643 102 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 RNU6-197P-201ENST00000516680 100 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.65□□□□□ -2.3
NPHP4O75161 AC136628.3-201ENST00000521868 290 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 APOOP3-201ENST00000536787 586 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 AC090049.2-201ENST00000550377 109 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 AC010525.2-201ENST00000590920 195 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 AC005592.1-201ENST00000566527 1640 ntBASIC0.65□□□□□ -2.3
NPHP4O75161 RNU4-67P-201ENST00000364569 141 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 RNU6-424P-201ENST00000384367 105 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 MIR517A-201ENST00000385001 87 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 AL451046.2-201ENST00000403074 277 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.64□□□□□ -2.31
NPHP4O75161 RNU6-322P-201ENST00000516010 103 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 Y_RNA.704-201ENST00000516851 102 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 AC090142.3-201ENST00000519012 385 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.64□□□□□ -2.31
NPHP4O75161 AL162424.1-201ENST00000602325 221 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 RN7SKP299-201ENST00000606679 301 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.64□□□□□ -2.31
NPHP4O75161 MIR6759-201ENST00000638110 65 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 MTND5P26-201ENST00000426018 1752 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 Y_RNA.179-201ENST00000363844 90 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 SNORD115-32-201ENST00000364079 82 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 Y_RNA.267-201ENST00000364679 109 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 RNU6-793P-201ENST00000384233 104 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 RNU6-159P-201ENST00000391080 106 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 MIR942-201ENST00000401111 86 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.64□□□□□ -2.31
NPHP4O75161 MRPS10P1-201ENST00000448483 130 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 NDUFB4P10-201ENST00000452541 359 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.64□□□□□ -2.31
NPHP4O75161 RNU7-94P-201ENST00000459576 63 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 Y_RNA.665-201ENST00000516177 98 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 RNU6-1198P-201ENST00000516904 67 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 AP002001.1-203ENST00000534002 267 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms