Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 Y_RNA.569-201ENST00000384749 103 ntBASIC2.35□□□□□ -2.03
SNX2O60749 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SNX2O60749 MIR1283-2-201ENST00000408621 87 ntBASIC2.35□□□□□ -2.03
SNX2O60749 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX2O60749 AC060773.1-201ENST00000421698 310 ntBASIC2.35□□□□□ -2.03
SNX2O60749 SNORD65B-201ENST00000459126 73 ntBASIC2.35□□□□□ -2.03
SNX2O60749 RNU6-1132P-201ENST00000459214 107 ntBASIC2.35□□□□□ -2.03
SNX2O60749 MTND1P19-201ENST00000511780 315 ntBASIC2.35□□□□□ -2.03
SNX2O60749 Y_RNA.680-201ENST00000516441 93 ntBASIC2.35□□□□□ -2.03
SNX2O60749 RNA5SP24-201ENST00000516478 95 ntBASIC2.35□□□□□ -2.03
SNX2O60749 RNU6-856P-201ENST00000516959 98 ntBASIC2.35□□□□□ -2.03
SNX2O60749 AC027419.1-201ENST00000522976 328 ntBASIC2.35□□□□□ -2.03
SNX2O60749 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX2O60749 AC091544.4-201ENST00000555268 342 ntBASIC2.35□□□□□ -2.03
SNX2O60749 AC012433.1-201ENST00000588916 398 ntBASIC2.35□□□□□ -2.03
SNX2O60749 DEFB117-201ENST00000602356 141 ntBASIC2.35□□□□□ -2.03
SNX2O60749 AC006380.1-201ENST00000603598 186 ntBASIC2.35□□□□□ -2.03
SNX2O60749 AL627230.6-201ENST00000611129 280 ntBASIC2.35□□□□□ -2.03
SNX2O60749 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
SNX2O60749 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.35□□□□□ -2.03
SNX2O60749 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.34□□□□□ -2.03
SNX2O60749 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SNX2O60749 MTND5P6-201ENST00000422338 1798 ntBASIC2.34□□□□□ -2.03
SNX2O60749 AL391987.6-201ENST00000305671 199 ntBASIC2.34□□□□□ -2.03
SNX2O60749 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNX2O60749 RNA5SP212-201ENST00000391223 107 ntBASIC2.34□□□□□ -2.03
SNX2O60749 AL031003.1-201ENST00000404229 172 ntBASIC2.34□□□□□ -2.03
SNX2O60749 RNU4-53P-201ENST00000410828 140 ntBASIC2.34□□□□□ -2.03
SNX2O60749 BX510359.4-201ENST00000423750 193 ntBASIC2.34□□□□□ -2.03
SNX2O60749 POLR2KP2-201ENST00000438155 177 ntBASIC2.34□□□□□ -2.03
SNX2O60749 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.34□□□□□ -2.03
SNX2O60749 RNA5SP281-201ENST00000516504 135 ntBASIC2.34□□□□□ -2.03
SNX2O60749 RNU2-34P-201ENST00000516534 121 ntBASIC2.34□□□□□ -2.03
SNX2O60749 AC005828.6-201ENST00000606610 232 ntBASIC2.34□□□□□ -2.03
SNX2O60749 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
SNX2O60749 AL590808.1-201ENST00000618696 141 ntBASIC2.34□□□□□ -2.03
SNX2O60749 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
SNX2O60749 U6.104-201ENST00000637979 90 ntBASIC2.34□□□□□ -2.03
SNX2O60749 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SNX2O60749 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SNX2O60749 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
SNX2O60749 Y_RNA.124-201ENST00000363339 93 ntBASIC2.33□□□□□ -2.04
SNX2O60749 RNU6-324P-201ENST00000363957 106 ntBASIC2.33□□□□□ -2.04
SNX2O60749 Y_RNA.307-201ENST00000365022 117 ntBASIC2.33□□□□□ -2.04
SNX2O60749 SNORA20B-201ENST00000384220 132 ntBASIC2.33□□□□□ -2.04
SNX2O60749 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX2O60749 HMGN2P3-201ENST00000433603 273 ntBASIC2.33□□□□□ -2.04
SNX2O60749 HMGN2P5-201ENST00000436882 273 ntBASIC2.33□□□□□ -2.04
SNX2O60749 RN7SL429P-201ENST00000479090 223 ntBASIC2.33□□□□□ -2.04
SNX2O60749 RN7SL489P-201ENST00000486185 223 ntBASIC2.33□□□□□ -2.04
SNX2O60749 RN7SL327P-201ENST00000488659 223 ntBASIC2.33□□□□□ -2.04
SNX2O60749 AC079804.2-201ENST00000490376 200 ntBASIC2.33□□□□□ -2.04
SNX2O60749 MIR514B-201ENST00000516774 80 ntBASIC2.33□□□□□ -2.04
SNX2O60749 RPL21P9-201ENST00000556149 474 ntBASIC2.33□□□□□ -2.04
SNX2O60749 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX2O60749 AC010900.2-201ENST00000604508 210 ntBASIC2.33□□□□□ -2.04
SNX2O60749 RN7SL853P-201ENST00000617250 223 ntBASIC2.33□□□□□ -2.04
SNX2O60749 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX2O60749 Y_RNA.14-201ENST00000362415 103 ntBASIC2.32□□□□□ -2.04
SNX2O60749 RNU4-80P-201ENST00000363200 141 ntBASIC2.32□□□□□ -2.04
SNX2O60749 Y_RNA.401-201ENST00000383965 117 ntBASIC2.32□□□□□ -2.04
SNX2O60749 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.32□□□□□ -2.04
SNX2O60749 MTCO1P5-201ENST00000433573 344 ntBASIC2.32□□□□□ -2.04
SNX2O60749 AL121890.1-201ENST00000435457 205 ntBASIC2.32□□□□□ -2.04
SNX2O60749 RPL23AP6-201ENST00000446637 472 ntBASIC2.32□□□□□ -2.04
SNX2O60749 RNU1-131P-201ENST00000458943 161 ntBASIC2.32□□□□□ -2.04
SNX2O60749 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.32□□□□□ -2.04
SNX2O60749 MRPS17P9-201ENST00000511924 393 ntBASIC2.32□□□□□ -2.04
SNX2O60749 RNU2-31P-201ENST00000516954 155 ntBASIC2.32□□□□□ -2.04
SNX2O60749 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
SNX2O60749 U2.15-201ENST00000611544 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.16-201ENST00000613119 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.12-201ENST00000613778 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.9-201ENST00000615427 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.11-201ENST00000616345 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.2-201ENST00000616535 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.3-201ENST00000617785 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.19-201ENST00000618602 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 RNU2-1-201ENST00000618664 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.6-201ENST00000619225 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.5-201ENST00000619465 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 U2.10-201ENST00000620268 191 ntBASIC2.32□□□□□ -2.04
SNX2O60749 AC064859.1-201ENST00000624741 174 ntBASIC2.32□□□□□ -2.04
SNX2O60749 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.32□□□□□ -2.04
SNX2O60749 AL159152.1-201ENST00000635019 2587 ntBASIC2.32□□□□□ -2.04
SNX2O60749 RNA5SP276-201ENST00000362580 94 ntBASIC2.31□□□□□ -2.04
SNX2O60749 RNA5SP493-201ENST00000364115 91 ntBASIC2.31□□□□□ -2.04
SNX2O60749 RNU6-1240P-201ENST00000365155 104 ntBASIC2.31□□□□□ -2.04
SNX2O60749 Y_RNA.361-201ENST00000365515 120 ntBASIC2.31□□□□□ -2.04
SNX2O60749 Y_RNA.477-201ENST00000384352 108 ntBASIC2.31□□□□□ -2.04
SNX2O60749 Y_RNA.562-201ENST00000384695 113 ntBASIC2.31□□□□□ -2.04
SNX2O60749 AC090255.1-201ENST00000495779 349 ntBASIC2.31□□□□□ -2.04
SNX2O60749 SERF1AP1-201ENST00000514575 187 ntBASIC2.31□□□□□ -2.04
SNX2O60749 RNU6-1041P-201ENST00000516254 102 ntBASIC2.31□□□□□ -2.04
SNX2O60749 MIR4298-201ENST00000584380 73 ntBASIC2.31□□□□□ -2.04
SNX2O60749 AC006006.1-201ENST00000603082 144 ntBASIC2.31□□□□□ -2.04
SNX2O60749 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
SNX2O60749 AL773524.1-201ENST00000614065 229 ntBASIC2.31□□□□□ -2.04
SNX2O60749 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms