Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LDB2O43679 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LDB2O43679 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.12□□□□□ -2.07
LDB2O43679 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LDB2O43679 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LDB2O43679 Y_RNA.136-201ENST00000363444 102 ntBASIC2.12□□□□□ -2.07
LDB2O43679 SNORD115-30-201ENST00000364117 82 ntBASIC2.12□□□□□ -2.07
LDB2O43679 Y_RNA.243-201ENST00000364481 109 ntBASIC2.12□□□□□ -2.07
LDB2O43679 RNU6-418P-201ENST00000384035 107 ntBASIC2.12□□□□□ -2.07
LDB2O43679 Y_RNA.489-201ENST00000384410 101 ntBASIC2.12□□□□□ -2.07
LDB2O43679 RNU6-57P-201ENST00000411348 103 ntBASIC2.12□□□□□ -2.07
LDB2O43679 MTCO1P44-201ENST00000441935 243 ntBASIC2.12□□□□□ -2.07
LDB2O43679 AC016717.1-201ENST00000448918 286 ntBASIC2.12□□□□□ -2.07
LDB2O43679 SUMO1P2-201ENST00000452524 304 ntBASIC2.12□□□□□ -2.07
LDB2O43679 snoU13.15-201ENST00000459407 104 ntBASIC2.12□□□□□ -2.07
LDB2O43679 UBL5P3-201ENST00000475112 231 ntBASIC2.12□□□□□ -2.07
LDB2O43679 SCARNA24.2-201ENST00000516968 130 ntBASIC2.12□□□□□ -2.07
LDB2O43679 IGLV3-17-201ENST00000519099 244 ntBASIC2.12□□□□□ -2.07
LDB2O43679 AC009127.3-201ENST00000570531 403 ntBASIC2.12□□□□□ -2.07
LDB2O43679 MIR7843-201ENST00000622274 79 ntBASIC2.12□□□□□ -2.07
LDB2O43679 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
LDB2O43679 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
LDB2O43679 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LDB2O43679 SNORA25.1-201ENST00000362326 128 ntBASIC2.11□□□□□ -2.07
LDB2O43679 Y_RNA.99-201ENST00000363138 105 ntBASIC2.11□□□□□ -2.07
LDB2O43679 Y_RNA.476-201ENST00000384347 108 ntBASIC2.11□□□□□ -2.07
LDB2O43679 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
LDB2O43679 U3.40-201ENST00000408706 208 ntBASIC2.11□□□□□ -2.07
LDB2O43679 SNORA11.4-201ENST00000408823 129 ntBASIC2.11□□□□□ -2.07
LDB2O43679 MRPS10P1-201ENST00000448483 130 ntBASIC2.11□□□□□ -2.07
LDB2O43679 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.11□□□□□ -2.07
LDB2O43679 RNU6-1023P-201ENST00000516137 106 ntBASIC2.11□□□□□ -2.07
LDB2O43679 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.11□□□□□ -2.07
LDB2O43679 U2.14-201ENST00000615943 113 ntBASIC2.11□□□□□ -2.07
LDB2O43679 U6.115-201ENST00000636045 103 ntBASIC2.11□□□□□ -2.07
LDB2O43679 RNU6-1266P-201ENST00000362794 105 ntBASIC2.1□□□□□ -2.07
LDB2O43679 RNU6-324P-201ENST00000363957 106 ntBASIC2.1□□□□□ -2.07
LDB2O43679 Y_RNA.352-201ENST00000365439 102 ntBASIC2.1□□□□□ -2.07
LDB2O43679 Y_RNA.361-201ENST00000365515 120 ntBASIC2.1□□□□□ -2.07
LDB2O43679 Y_RNA.416-201ENST00000384014 113 ntBASIC2.1□□□□□ -2.07
LDB2O43679 Y_RNA.418-201ENST00000384029 102 ntBASIC2.1□□□□□ -2.07
LDB2O43679 RNU6-514P-201ENST00000384208 107 ntBASIC2.1□□□□□ -2.07
LDB2O43679 Y_RNA.478-201ENST00000384358 107 ntBASIC2.1□□□□□ -2.07
LDB2O43679 SNORD14D-201ENST00000384390 87 ntBASIC2.1□□□□□ -2.07
LDB2O43679 MIR504-201ENST00000385065 83 ntBASIC2.1□□□□□ -2.07
LDB2O43679 AL031003.1-201ENST00000404229 172 ntBASIC2.1□□□□□ -2.07
LDB2O43679 AC008134.1-201ENST00000420943 193 ntBASIC2.1□□□□□ -2.07
LDB2O43679 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.1□□□□□ -2.07
LDB2O43679 MTND1P19-201ENST00000511780 315 ntBASIC2.1□□□□□ -2.07
LDB2O43679 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
LDB2O43679 RNU6-436P-201ENST00000516171 114 ntBASIC2.1□□□□□ -2.07
LDB2O43679 Y_RNA.680-201ENST00000516441 93 ntBASIC2.1□□□□□ -2.07
LDB2O43679 AC121758.2-201ENST00000553271 193 ntBASIC2.1□□□□□ -2.07
LDB2O43679 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.1□□□□□ -2.07
LDB2O43679 MIR3128-201ENST00000581957 66 ntBASIC2.1□□□□□ -2.07
LDB2O43679 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.1□□□□□ -2.07
LDB2O43679 SNORD14A-201ENST00000606526 91 ntBASIC2.1□□□□□ -2.07
LDB2O43679 AC005828.6-201ENST00000606610 232 ntBASIC2.1□□□□□ -2.07
LDB2O43679 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.1□□□□□ -2.07
LDB2O43679 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.1□□□□□ -2.07
LDB2O43679 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LDB2O43679 MIR340-201ENST00000362125 95 ntBASIC2.09□□□□□ -2.07
LDB2O43679 Y_RNA.329-201ENST00000365209 107 ntBASIC2.09□□□□□ -2.07
LDB2O43679 Y_RNA.477-201ENST00000384352 108 ntBASIC2.09□□□□□ -2.07
LDB2O43679 EDDM3CP-201ENST00000415977 425 ntBASIC2.09□□□□□ -2.07
LDB2O43679 MTCO1P5-201ENST00000433573 344 ntBASIC2.09□□□□□ -2.07
LDB2O43679 RNU6-856P-201ENST00000516959 98 ntBASIC2.09□□□□□ -2.07
LDB2O43679 AC025647.1-201ENST00000517879 253 ntBASIC2.09□□□□□ -2.07
LDB2O43679 AC087441.2-201ENST00000529141 262 ntBASIC2.09□□□□□ -2.07
LDB2O43679 CYCSP26-201ENST00000534107 320 ntBASIC2.09□□□□□ -2.07
LDB2O43679 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
LDB2O43679 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.09□□□□□ -2.07
LDB2O43679 MIR5694-201ENST00000581190 76 ntBASIC2.09□□□□□ -2.07
LDB2O43679 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.09□□□□□ -2.07
LDB2O43679 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.09□□□□□ -2.07
LDB2O43679 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LDB2O43679 Y_RNA.60-201ENST00000362831 98 ntBASIC2.08□□□□□ -2.08
LDB2O43679 RNU6-379P-201ENST00000363813 104 ntBASIC2.08□□□□□ -2.08
LDB2O43679 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
LDB2O43679 AC024067.1-201ENST00000426199 223 ntBASIC2.08□□□□□ -2.08
LDB2O43679 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
LDB2O43679 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.08□□□□□ -2.08
LDB2O43679 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.08□□□□□ -2.08
LDB2O43679 DEFB117-201ENST00000602356 141 ntBASIC2.08□□□□□ -2.08
LDB2O43679 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.08□□□□□ -2.08
LDB2O43679 AL159152.1-201ENST00000635019 2587 ntBASIC2.08□□□□□ -2.08
LDB2O43679 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LDB2O43679 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LDB2O43679 Y_RNA.20-201ENST00000362479 113 ntBASIC2.07□□□□□ -2.08
LDB2O43679 SNORD114-7-201ENST00000362520 77 ntBASIC2.07□□□□□ -2.08
LDB2O43679 Y_RNA.44-201ENST00000362676 108 ntBASIC2.07□□□□□ -2.08
LDB2O43679 RNU4-80P-201ENST00000363200 141 ntBASIC2.07□□□□□ -2.08
LDB2O43679 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
LDB2O43679 SNORA20.1-201ENST00000364790 130 ntBASIC2.07□□□□□ -2.08
LDB2O43679 SNORA67.3-201ENST00000384366 140 ntBASIC2.07□□□□□ -2.08
LDB2O43679 RNU1-148P-201ENST00000384472 162 ntBASIC2.07□□□□□ -2.08
LDB2O43679 RNU6-1248P-201ENST00000391096 64 ntBASIC2.07□□□□□ -2.08
LDB2O43679 AL603910.2-201ENST00000407268 136 ntBASIC2.07□□□□□ -2.08
LDB2O43679 MIR1262-201ENST00000408276 93 ntBASIC2.07□□□□□ -2.08
LDB2O43679 AL139156.1-201ENST00000412785 841 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms