Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZNF209P-201ENST00000593450 2304 ntBASIC1.22□□□□□ -2.21
RIPK2O43353 snoU2-30.2-201ENST00000362805 70 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 Y_RNA.140-201ENST00000363474 103 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 U3.8-201ENST00000363675 217 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 Y_RNA.263-201ENST00000364659 114 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 Y_RNA.287-201ENST00000364853 94 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 Y_RNA.387-201ENST00000383918 102 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 RNY4P36-201ENST00000391116 96 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 MRPS18CP6-201ENST00000423587 223 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.21□□□□□ -2.22
RIPK2O43353 RPL23AP50-201ENST00000434149 455 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.21□□□□□ -2.22
RIPK2O43353 MTATP6P23-201ENST00000440153 476 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.21□□□□□ -2.22
RIPK2O43353 NDUFB4P10-201ENST00000452541 359 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 RPL30P15-201ENST00000457129 321 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 Y_RNA.653-201ENST00000459091 95 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 Y_RNA.683-201ENST00000516508 93 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 AC025647.1-201ENST00000517879 253 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 AC091144.1-201ENST00000519573 138 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 AC024995.1-201ENST00000523014 93 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 MIR5690-201ENST00000583739 73 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 AL365434.2-201ENST00000607979 234 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 AC025253.1-201ENST00000613623 543 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 AC087588.2-201ENST00000617667 426 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.21□□□□□ -2.22
RIPK2O43353 AC112487.2-201ENST00000637950 304 ntBASIC1.21□□□□□ -2.22
RIPK2O43353 RNU5F-3P-201ENST00000363767 117 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 RNU6-318P-201ENST00000384283 103 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 MIR559-201ENST00000385188 96 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RIPK2O43353 RNU6-1009P-201ENST00000390996 107 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RIPK2O43353 MTCYBP4-201ENST00000401524 249 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.2□□□□□ -2.22
RIPK2O43353 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.2□□□□□ -2.22
RIPK2O43353 ELOCP24-201ENST00000456370 334 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 AC105758.1-201ENST00000506038 399 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.2□□□□□ -2.22
RIPK2O43353 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 Y_RNA.718-201ENST00000517110 102 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 AL442163.3-201ENST00000554110 156 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 MIR4303-201ENST00000581299 66 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
RIPK2O43353 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RIPK2O43353 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RIPK2O43353 Y_RNA.70-201ENST00000362886 110 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 RNU1-17P-201ENST00000363022 152 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 RNU6-879P-201ENST00000364328 108 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 Y_RNA.259-201ENST00000364619 101 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 RNU6-1145P-201ENST00000384246 107 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 Y_RNA.577-201ENST00000384794 101 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 MIR1185-2-201ENST00000408687 86 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 ELOCP21-201ENST00000412558 336 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 Y_RNA.632-201ENST00000459189 102 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.19□□□□□ -2.22
RIPK2O43353 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.19□□□□□ -2.22
RIPK2O43353 RNU6-470P-201ENST00000515954 104 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 AC022868.1-201ENST00000517767 391 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.19□□□□□ -2.22
RIPK2O43353 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 AC084781.2-201ENST00000615568 161 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.19□□□□□ -2.22
RIPK2O43353 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
RIPK2O43353 RNU6-1301P-201ENST00000362724 104 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 RNU1-22P-201ENST00000363334 158 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 Y_RNA.356-201ENST00000365475 113 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 Y_RNA.384-201ENST00000383909 102 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 RNU6-417P-201ENST00000384712 107 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 RNU6-1156P-201ENST00000410365 100 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 AF228730.4-201ENST00000421457 183 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.18□□□□□ -2.22
RIPK2O43353 AC093019.1-201ENST00000443135 252 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 RNU7-152P-201ENST00000458982 64 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 MIR2053-201ENST00000459295 91 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 RNU7-34P-201ENST00000459394 64 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 SNORD19B-201ENST00000459623 84 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.18□□□□□ -2.22
RIPK2O43353 AP002001.1-203ENST00000534002 267 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.18□□□□□ -2.22
RIPK2O43353 AC080078.3-201ENST00000605407 463 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 Y_RNA.804-201ENST00000615262 101 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.18□□□□□ -2.22
RIPK2O43353 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RIPK2O43353 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
RIPK2O43353 Y_RNA.58-201ENST00000362807 102 ntBASIC1.17□□□□□ -2.22
RIPK2O43353 Y_RNA.154-201ENST00000363624 102 ntBASIC1.17□□□□□ -2.22
RIPK2O43353 RNY3P11-201ENST00000364153 102 ntBASIC1.17□□□□□ -2.22
RIPK2O43353 RNY3P1-201ENST00000365085 102 ntBASIC1.17□□□□□ -2.22
RIPK2O43353 SNORA4.2-201ENST00000365313 147 ntBASIC1.17□□□□□ -2.22
RIPK2O43353 RNY3-201ENST00000365484 102 ntBASIC1.17□□□□□ -2.22
RIPK2O43353 RNA5SP259-201ENST00000365541 109 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms