Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 AC134698.4-201ENST00000523451 826 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 AL358944.1-201ENST00000528537 144 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 LRRC34P1-201ENST00000542742 915 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 MIR4714-201ENST00000580728 77 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 MIR3192-201ENST00000584920 77 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 MIR4760-201ENST00000585040 80 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 RNU6-89P-201ENST00000606519 100 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 AC009229.3-201ENST00000608056 282 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 AC010999.1-201ENST00000611856 324 ntBASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RBFOX3A6NFN3 RNA5SP264-201ENST00000363115 107 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 RNY1-201ENST00000364228 113 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 SNORA20B-201ENST00000384220 132 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 RNU6-95P-201ENST00000384697 107 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 RPL30P16-201ENST00000419341 429 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 AC233266.1-201ENST00000454518 96 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 AC083904.1-201ENST00000487828 231 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 MTND4LP26-201ENST00000518144 282 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 AP003716.2-201ENST00000528260 108 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 AC004812.1-201ENST00000540773 146 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 AC242852.1-201ENST00000612151 96 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 AC023510.2-201ENST00000622162 746 ntBASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.42□□□□□ -2.34
RBFOX3A6NFN3 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 MIR891A-201ENST00000401237 79 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 RNU5A-5P-201ENST00000411054 116 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 AC018865.2-201ENST00000423631 129 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 ERLEC1P1-201ENST00000433806 578 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 MTND1P11-201ENST00000456661 876 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 HMGN2P26-201ENST00000463169 339 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 ACA59.1-201ENST00000515966 143 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 Y_RNA.683-201ENST00000516508 93 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 MIR5696-201ENST00000578474 85 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 AC131055.1-201ENST00000584626 316 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 AC022709.1-201ENST00000615967 87 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 SEPT14P17-201ENST00000617978 177 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 AC099654.12-201ENST00000639868 649 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 AC068700.1-201ENST00000565862 3754 ntBASIC0.41□□□□□ -2.34
RBFOX3A6NFN3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.34
RBFOX3A6NFN3 SNORA27.1-201ENST00000362604 124 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 RNU6-376P-201ENST00000384731 106 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 MIR598-201ENST00000384868 97 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 MIR517A-201ENST00000385001 87 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 SNORD99-201ENST00000408612 74 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 AC243428.1-201ENST00000421099 264 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 AC018710.1-201ENST00000506509 158 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 AL158211.1-201ENST00000566763 763 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 AC007014.2-201ENST00000615581 479 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 AC244015.1-201ENST00000622301 99 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 AC027279.3-201ENST00000625055 122 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 AC068137.3-201ENST00000639191 341 ntBASIC0.4□□□□□ -2.35
RBFOX3A6NFN3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 RNU6-1264P-201ENST00000383891 107 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 MIR520G-201ENST00000385064 90 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 SNORD89-201ENST00000390981 114 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 MTCYBP4-201ENST00000401524 249 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 RPL23AP50-201ENST00000434149 455 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 AL162725.1-201ENST00000435405 301 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 Z98949.2-201ENST00000440996 144 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 MTCO1P19-201ENST00000443487 500 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 CYCTP-201ENST00000504253 315 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 RNA5SP20-201ENST00000515976 84 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 RNU6-107P-201ENST00000516643 102 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 AC109810.1-201ENST00000534066 224 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 AC121247.2-201ENST00000604776 136 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.39□□□□□ -2.35
RBFOX3A6NFN3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
RBFOX3A6NFN3 MIR103A2-201ENST00000362154 78 ntBASIC0.38□□□□□ -2.35
RBFOX3A6NFN3 RNU4-41P-201ENST00000364426 143 ntBASIC0.38□□□□□ -2.35
RBFOX3A6NFN3 RNU1-133P-201ENST00000364867 167 ntBASIC0.38□□□□□ -2.35
RBFOX3A6NFN3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.38□□□□□ -2.35
RBFOX3A6NFN3 Y_RNA.409-201ENST00000383990 98 ntBASIC0.38□□□□□ -2.35
RBFOX3A6NFN3 RNU1-139P-201ENST00000391307 165 ntBASIC0.38□□□□□ -2.35
RBFOX3A6NFN3 ZNF885P-201ENST00000420174 1098 ntBASIC0.38□□□□□ -2.35
RBFOX3A6NFN3 MTCYBP10-201ENST00000424905 650 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms