Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 AC092954.2-201ENST00000609103 430 ntBASIC0.76□□□□□ -2.29
SMCO2A6NFE2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.76□□□□□ -2.29
SMCO2A6NFE2 Y_RNA.184-201ENST00000363884 108 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 Y_RNA.373-201ENST00000365600 103 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 RNU6-281P-201ENST00000384212 103 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 RNU6-541P-201ENST00000384709 110 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 MIR562-201ENST00000384894 95 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 MIR100-201ENST00000385259 80 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 AL451046.2-201ENST00000403074 277 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.75□□□□□ -2.29
SMCO2A6NFE2 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 MTCO2P7-201ENST00000446518 666 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.75□□□□□ -2.29
SMCO2A6NFE2 RPS27P22-201ENST00000478056 241 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 AC107401.1-201ENST00000503426 685 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 MIR3684-201ENST00000579779 74 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 NBR2-204ENST00000587322 63 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 AC004832.4-201ENST00000608952 331 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 AC010999.1-201ENST00000611856 324 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 AC008163.1-202ENST00000636004 2889 ntBASIC0.75□□□□□ -2.29
SMCO2A6NFE2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SMCO2A6NFE2 SNORD116-11-201ENST00000383882 92 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 SNORA20B-201ENST00000384220 132 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 Y_RNA.490-201ENST00000384413 102 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 RPL30P16-201ENST00000419341 429 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO2A6NFE2 RNU7-21P-201ENST00000459430 62 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO2A6NFE2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO2A6NFE2 RNU6-322P-201ENST00000516010 103 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 AC027419.1-201ENST00000522976 328 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 AC019193.3-201ENST00000609144 554 ntBASIC0.74□□□□□ -2.29
SMCO2A6NFE2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SMCO2A6NFE2 RNU6-1252P-201ENST00000363054 104 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 RNU6-595P-201ENST00000363944 107 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 Y_RNA.414-201ENST00000384011 101 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 RNY1P14-201ENST00000384426 108 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 RNU5A-5P-201ENST00000411054 116 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 MTATP6P13-201ENST00000438531 667 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 AC093850.1-201ENST00000454121 251 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 snoU13.25-201ENST00000458945 104 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 RNU7-175P-201ENST00000515915 61 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 RNA5SP220-201ENST00000516298 104 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 Y_RNA.683-201ENST00000516508 93 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 RNU7-172P-201ENST00000517125 64 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 AC090142.3-201ENST00000519012 385 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.73□□□□□ -2.29
SMCO2A6NFE2 MTND3P12-201ENST00000559068 328 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 MIR1321-201ENST00000637766 79 ntBASIC0.73□□□□□ -2.29
SMCO2A6NFE2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SMCO2A6NFE2 RNA5SP482-201ENST00000391269 118 ntBASIC0.72□□□□□ -2.29
SMCO2A6NFE2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.72□□□□□ -2.29
SMCO2A6NFE2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.72□□□□□ -2.29
SMCO2A6NFE2 RNU6-1114P-201ENST00000516022 107 ntBASIC0.72□□□□□ -2.29
SMCO2A6NFE2 SNORA70.12-201ENST00000516084 153 ntBASIC0.72□□□□□ -2.29
SMCO2A6NFE2 AP002001.1-203ENST00000534002 267 ntBASIC0.72□□□□□ -2.29
SMCO2A6NFE2 AL117336.2-201ENST00000602435 335 ntBASIC0.72□□□□□ -2.29
SMCO2A6NFE2 ZNF299P-201ENST00000406845 1804 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 MIR410-201ENST00000362222 80 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 SNORA1B-201ENST00000362535 133 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 Y_RNA.265-201ENST00000364677 108 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 MIR518E-201ENST00000385252 88 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 MIR942-201ENST00000401111 86 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 MTND3P23-201ENST00000431980 347 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 RPL39P39-201ENST00000455840 151 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AC091021.1-201ENST00000468051 388 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AC046134.1-201ENST00000514454 666 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 Y_RNA.704-201ENST00000516851 102 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AL358944.1-201ENST00000528537 144 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AP002004.2-201ENST00000531656 154 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AC068790.6-201ENST00000602558 258 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AC005828.6-201ENST00000606610 232 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AL391903.3-201ENST00000612158 163 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 AC005592.1-201ENST00000566527 1640 ntBASIC0.71□□□□□ -2.3
SMCO2A6NFE2 SNORA27.1-201ENST00000362604 124 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 RNU6-117P-201ENST00000365415 107 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 RNU6-1264P-201ENST00000383891 107 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 Y_RNA.405-201ENST00000383979 100 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 Y_RNA.451-201ENST00000384200 100 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 Y_RNA.524-201ENST00000384564 100 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 Y_RNA.533-201ENST00000384596 114 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 Y_RNA.561-201ENST00000384694 100 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 SNORA75.2-201ENST00000391138 150 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 SNORA75.3-201ENST00000391231 150 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 ELOCP21-201ENST00000412558 336 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.7□□□□□ -2.3
SMCO2A6NFE2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
SMCO2A6NFE2 MTND1P29-201ENST00000448112 647 ntBASIC0.7□□□□□ -2.3
SMCO2A6NFE2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms