Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 MTCO2P7-201ENST00000446518 666 ntBASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU7-21P-201ENST00000459430 62 ntBASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 Y_RNA.665-201ENST00000516177 98 ntBASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU6-341P-201ENST00000516973 96 ntBASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 MIR4273-201ENST00000582824 84 ntBASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 DISC2.1-201ENST00000612827 205 ntBASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AL138726.1-201ENST00000614873 333 ntBASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.68□□□□□ -2.3
TRBV11-1A0A0K0K1C0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNA5SP361-201ENST00000362686 118 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU4-12P-201ENST00000365233 139 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU6-407P-201ENST00000365280 104 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 SNORA20B-201ENST00000384220 132 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 SNORD116-13-201ENST00000384408 92 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU6-376P-201ENST00000384731 106 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 MIR10B-201ENST00000385011 110 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU6-1281P-201ENST00000516223 105 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 Y_RNA.683-201ENST00000516508 93 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU6-256P-201ENST00000516747 97 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AP002004.2-201ENST00000531656 154 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AL162413.1-201ENST00000603198 110 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC092954.2-201ENST00000609103 430 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AL359880.1-201ENST00000621879 266 ntBASIC0.67□□□□□ -2.3
TRBV11-1A0A0K0K1C0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 SNORA1B-201ENST00000362535 133 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNA5SP482-201ENST00000391269 118 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC018710.1-201ENST00000506509 158 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC010486.3-201ENST00000511602 785 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU6-1291P-201ENST00000516591 104 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 RNU6-405P-201ENST00000516637 110 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 AL117336.2-201ENST00000602435 335 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 CASC19-280ENST00000642102 1351 ntBASIC0.66□□□□□ -2.3
TRBV11-1A0A0K0K1C0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
TRBV11-1A0A0K0K1C0 Y_RNA.118-201ENST00000363300 101 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.405-201ENST00000383979 100 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.451-201ENST00000384200 100 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.524-201ENST00000384564 100 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.530-201ENST00000384587 101 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.561-201ENST00000384694 100 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 SNORA75.2-201ENST00000391138 150 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 SNORA75.3-201ENST00000391231 150 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 MTCYBP4-201ENST00000401524 249 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 ZNF885P-201ENST00000420174 1098 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 USMG5P1-201ENST00000425964 177 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC233266.1-201ENST00000454518 96 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC245047.8-201ENST00000456455 284 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 snoU13.18-201ENST00000459483 104 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 RNA5SP20-201ENST00000515976 84 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 SNORD111.1-201ENST00000516421 86 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 MIR5696-201ENST00000578474 85 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC242852.1-201ENST00000612151 96 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC244015.1-201ENST00000622301 99 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC023934.1-201ENST00000574529 2389 ntBASIC0.65□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC243428.1-201ENST00000421099 264 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC018865.2-201ENST00000423631 129 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 MTND1P26-201ENST00000440488 538 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AL049830.1-201ENST00000468034 425 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC091178.2-201ENST00000584401 117 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC012557.2-201ENST00000605919 418 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC004832.4-201ENST00000608952 331 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AL096861.1-201ENST00000610899 123 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.796-201ENST00000364268 102 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.799-201ENST00000364992 102 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 RNU6-483P-201ENST00000384088 108 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.533-201ENST00000384596 114 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 RNU6-1278P-201ENST00000516130 107 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.704-201ENST00000516851 102 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.706-201ENST00000516933 99 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC093023.1-201ENST00000547375 507 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 MIR3684-201ENST00000579779 74 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 MIR3672-201ENST00000584290 82 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 AC022709.1-201ENST00000615967 87 ntBASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.212-201ENST00000364177 102 ntBASIC0.62□□□□□ -2.31
TRBV11-1A0A0K0K1C0 Y_RNA.330-201ENST00000365230 109 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms