Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 SNRPGP12-201ENST00000449481 213 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 MTCO3P10-201ENST00000455912 772 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 NDUFA4P2-201ENST00000489989 244 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 MTATP6P9-201ENST00000515039 680 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 MTND4P7-201ENST00000523876 130 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 AC010620.1-201ENST00000601088 1102 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 AC087683.2-201ENST00000611384 326 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 uc_338.34-201ENST00000617467 174 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 AP000720.1-201ENST00000625091 483 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 AC106754.1-201ENST00000562632 1513 ntBASIC0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-369P-201ENST00000362515 102 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 SNORD50.1-201ENST00000362987 71 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-82P-201ENST00000363970 107 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-654P-201ENST00000364373 107 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 Y_RNA.258-201ENST00000364613 105 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR452-201ENST00000385020 85 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU2-9P-201ENST00000410194 145 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-994P-201ENST00000410507 111 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 BX295541.1-201ENST00000417774 250 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC073415.1-201ENST00000449240 153 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 SNORD11.1-201ENST00000459482 85 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC091179.3-201ENST00000474761 144 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 SNORA18.6-201ENST00000516792 115 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC104576.1-201ENST00000524225 88 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC010999.1-201ENST00000611856 324 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC015726.2-201ENST00000620112 122 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC005609.4-201ENST00000625071 447 ntBASIC0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR1-1-201ENST00000362147 71 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR18A-201ENST00000362310 71 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 RNA5SP325-201ENST00000363756 130 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-873P-201ENST00000363833 107 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 SNORA20B-201ENST00000384220 132 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR520C-201ENST00000385005 87 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 RNA5SP95-201ENST00000410319 137 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MTCYBP8-201ENST00000422855 651 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 CYCSP46-201ENST00000423569 204 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC079354.2-201ENST00000453523 154 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 HSFY5P-201ENST00000453726 309 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 HMGN1P10-201ENST00000474557 553 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC074133.1-201ENST00000515696 183 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-189P-201ENST00000516120 101 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 EIF1P4-201ENST00000572664 335 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR4305-201ENST00000583252 102 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC120024.3-201ENST00000603167 156 ntBASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 RNA5SP62-201ENST00000363457 110 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 Y_RNA.159-201ENST00000363674 87 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 RNA5SP48-201ENST00000363969 126 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-159P-201ENST00000391080 106 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR1298-201ENST00000408783 112 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-1304P-201ENST00000411374 106 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 MTCO2P11-201ENST00000431069 680 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AL359672.1-201ENST00000442302 409 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AC093534.1-201ENST00000504977 132 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AC093303.1-201ENST00000514549 295 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-1291P-201ENST00000516591 104 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AC091144.1-201ENST00000519573 138 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AC100830.2-201ENST00000581636 240 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AC090616.2-202ENST00000584248 222 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 AL158063.1-201ENST00000615349 536 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR4315-1-201ENST00000636800 73 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR4315-2-201ENST00000640925 73 ntBASIC0□□□□□ -2.41
TRAV1-1A0A0B4J248 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-727P-201ENST00000363592 107 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU4-9P-201ENST00000364951 139 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC117470.1-201ENST00000381974 330 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-815P-201ENST00000384080 113 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR521-1-201ENST00000384902 87 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR518A1-201ENST00000385068 85 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MTATP6P18-201ENST00000417994 673 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 PCNPP5-201ENST00000452246 481 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MTCO1P29-201ENST00000496868 288 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MTND1P22-201ENST00000510572 951 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC023442.1-201ENST00000531247 422 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR3684-201ENST00000579779 74 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR4764-201ENST00000580680 88 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR4300-201ENST00000581016 96 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 PIGPP4-201ENST00000584447 307 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR5692C1-201ENST00000585309 91 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AL162730.1-201ENST00000605734 292 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC016597.2-201ENST00000613256 341 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms