Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 TOMM22P2-201ENST00000430735 237 ntBASIC1.36□□□□□ -2.19
SMC3Q9UQE7 HMGN2P34-201ENST00000437647 269 ntBASIC1.36□□□□□ -2.19
SMC3Q9UQE7 AL135790.2-201ENST00000437701 267 ntBASIC1.36□□□□□ -2.19
SMC3Q9UQE7 AC092473.1-201ENST00000441098 221 ntBASIC1.36□□□□□ -2.19
SMC3Q9UQE7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.36□□□□□ -2.19
SMC3Q9UQE7 AC116353.2-201ENST00000505332 712 ntBASIC1.36□□□□□ -2.19
SMC3Q9UQE7 SNORA20.3-201ENST00000516880 132 ntBASIC1.36□□□□□ -2.19
SMC3Q9UQE7 AC008873.1-201ENST00000625051 138 ntBASIC1.36□□□□□ -2.19
SMC3Q9UQE7 Y_RNA.72-201ENST00000362894 103 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 RNY1P16-201ENST00000363063 111 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 SNORA7.1-201ENST00000363750 139 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 RNU6-708P-201ENST00000384217 107 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 Y_RNA.557-201ENST00000384680 107 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 MIR194-1-201ENST00000384892 85 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 MIR153-2-201ENST00000385225 87 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 RNA5SP109-201ENST00000391010 116 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 MIR1253-201ENST00000408273 105 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.35□□□□□ -2.19
SMC3Q9UQE7 AC009474.2-201ENST00000451383 136 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 AC091951.2-201ENST00000500762 203 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.35□□□□□ -2.19
SMC3Q9UQE7 AC105029.1-201ENST00000520250 669 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 AC093027.1-201ENST00000546698 429 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 AC093023.1-201ENST00000547375 507 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 MIR5701-3-201ENST00000578890 82 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 MIR5701-1-201ENST00000585138 82 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 AL355073.2-201ENST00000612106 557 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.35□□□□□ -2.19
SMC3Q9UQE7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 MIR5701-2-201ENST00000615634 82 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 snoZ196.1-201ENST00000625269 89 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 AC099654.14-201ENST00000638599 341 ntBASIC1.35□□□□□ -2.19
SMC3Q9UQE7 Y_RNA.58-201ENST00000362807 102 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 Y_RNA.154-201ENST00000363624 102 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 RNY3P1-201ENST00000365085 102 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 RNY3-201ENST00000365484 102 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 RNU6-890P-201ENST00000384121 107 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 Y_RNA.490-201ENST00000384413 102 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
SMC3Q9UQE7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.34□□□□□ -2.19
SMC3Q9UQE7 RPL23AP50-201ENST00000434149 455 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 AL603825.1-201ENST00000438481 80 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.34□□□□□ -2.19
SMC3Q9UQE7 RNU7-169P-201ENST00000459456 61 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 RNU6-277P-201ENST00000516272 106 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 RNU6-107P-201ENST00000516643 102 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 Y_RNA.708-201ENST00000516950 96 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.34□□□□□ -2.19
SMC3Q9UQE7 7SK.7-201ENST00000603504 247 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 SNORD11B-201ENST00000607707 90 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 AC022306.2-201ENST00000617563 647 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.34□□□□□ -2.19
SMC3Q9UQE7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
SMC3Q9UQE7 MTND5P35-201ENST00000557537 1720 ntBASIC1.34□□□□□ -2.2
SMC3Q9UQE7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 RNU6-137P-201ENST00000363680 108 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 RNU6-281P-201ENST00000384212 103 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 RNU6-318P-201ENST00000384283 103 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 SNORD116-29-201ENST00000384516 83 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SMC3Q9UQE7 AC008134.1-201ENST00000420943 193 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 AC010154.1-201ENST00000425857 269 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 USP9YP16-201ENST00000430287 407 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.33□□□□□ -2.2
SMC3Q9UQE7 AC073910.1-201ENST00000445047 438 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 USP9YP23-201ENST00000455085 407 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.33□□□□□ -2.2
SMC3Q9UQE7 snoU13.27-201ENST00000459278 104 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 AL163540.1-201ENST00000485382 386 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 RNU7-175P-201ENST00000515915 61 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.691-201ENST00000516611 103 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 AC022868.1-201ENST00000517767 391 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 AC055872.1-201ENST00000570978 278 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 snoU13.31-201ENST00000607291 104 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 AC122108.2-201ENST00000611946 526 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 U6.108-201ENST00000637764 58 ntBASIC1.33□□□□□ -2.2
SMC3Q9UQE7 SNORA72.1-201ENST00000363485 129 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 RNU6-1188P-201ENST00000363795 107 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.32□□□□□ -2.2
SMC3Q9UQE7 RNU6-926P-201ENST00000384075 107 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 MIR190B-201ENST00000401119 79 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 MRPL35P1-201ENST00000404272 572 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 COX6CP10-201ENST00000416832 224 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.32□□□□□ -2.2
SMC3Q9UQE7 CHEK2P4-201ENST00000450340 246 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.32□□□□□ -2.2
SMC3Q9UQE7 MIR2053-201ENST00000459295 91 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 AC093852.1-201ENST00000503587 266 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.32□□□□□ -2.2
SMC3Q9UQE7 AC025647.1-201ENST00000517879 253 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 AC024995.1-201ENST00000523014 93 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 AC023157.2-201ENST00000540596 141 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 MIR4498-201ENST00000577599 66 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 AC112487.2-201ENST00000637950 304 ntBASIC1.32□□□□□ -2.2
SMC3Q9UQE7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.31□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.179-201ENST00000363844 90 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms