Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.68□□□□□ -2.52
SHANK2Q9UPX8 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.68□□□□□ -2.52
SHANK2Q9UPX8 AC068792.1-201ENST00000621354 417 ntBASIC-0.68□□□□□ -2.52
SHANK2Q9UPX8 AL136221.1-201ENST00000621449 509 ntBASIC-0.68□□□□□ -2.52
SHANK2Q9UPX8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 AC114491.1-201ENST00000416095 246 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 AC007327.1-201ENST00000447461 264 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 AC079354.2-201ENST00000453523 154 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 MTCO3P8-201ENST00000453691 755 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 RNU2-10P-201ENST00000516375 211 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 MRPS36P4-201ENST00000534436 298 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 AC008608.1-201ENST00000603910 127 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 AC246785.4-201ENST00000605374 287 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 AC020891.4-201ENST00000605745 93 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 AC072039.2-201ENST00000608883 439 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.69□□□□□ -2.52
SHANK2Q9UPX8 SNORD14.1-201ENST00000365609 90 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 MIR516B2-201ENST00000385190 85 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 AC009237.7-201ENST00000447357 229 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 AC087499.4-201ENST00000448505 178 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 RPL39P34-201ENST00000477141 156 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 RNU7-28P-201ENST00000516759 62 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 RNA5SP454-201ENST00000517231 127 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 FRG2DP-202ENST00000566967 323 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 MIR5692A1-201ENST00000580523 69 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 AC090897.1-201ENST00000580909 226 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 MIR3666-201ENST00000607845 111 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 MIR7107-201ENST00000611489 80 ntBASIC-0.7□□□□□ -2.52
SHANK2Q9UPX8 RNU6-137P-201ENST00000363680 108 ntBASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 AL049545.1-201ENST00000401856 572 ntBASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 RNU6-607P-201ENST00000411283 108 ntBASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 PIGPP3-201ENST00000425307 415 ntBASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 AC079781.2-201ENST00000446424 169 ntBASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 SUMO1P2-201ENST00000452524 304 ntBASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 AL445523.1-201ENST00000451184 1362 ntBASIC-0.71□□□□□ -2.52
SHANK2Q9UPX8 SNORA1B-201ENST00000362535 133 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 RNU6-207P-201ENST00000384137 107 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 USP9YP11-201ENST00000427537 717 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 RPS24P1-201ENST00000438550 371 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 AC091021.1-201ENST00000468051 388 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 AC010376.1-201ENST00000522101 334 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 MIR378F-201ENST00000578143 78 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 AL078596.1-201ENST00000624856 447 ntBASIC-0.72□□□□□ -2.52
SHANK2Q9UPX8 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 RNU4-84P-201ENST00000364200 139 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 RNU6-354P-201ENST00000383862 107 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 RNU6-610P-201ENST00000384264 107 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AL355143.1-201ENST00000407101 841 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 PCNPP5-201ENST00000452246 481 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 MIR2115-201ENST00000516657 100 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 SNORA18.7-201ENST00000516910 131 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 RNA5SP117-201ENST00000365294 118 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 SNORA67.2-201ENST00000384300 149 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 RNA5SP482-201ENST00000391269 118 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 RPS29P13-201ENST00000402041 169 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 MIR1298-201ENST00000408783 112 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 RNU4-30P-201ENST00000410245 143 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 Z98949.2-201ENST00000440996 144 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AC026782.1-201ENST00000512952 449 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AC138869.1-201ENST00000568623 124 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AC100830.2-201ENST00000581636 240 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 MIR4438-201ENST00000585271 93 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AL596327.1-201ENST00000603629 213 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 AL139286.2-201ENST00000606838 396 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 MIR4788-201ENST00000639104 80 ntBASIC-0.73□□□□□ -2.53
SHANK2Q9UPX8 MIR365A-201ENST00000362260 87 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 SNORD45.3-201ENST00000363836 72 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 RNU6-652P-201ENST00000365488 107 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 MTND1P4-201ENST00000435196 415 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 AC007215.1-201ENST00000464893 276 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 AC026470.2-201ENST00000561492 181 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 AP000907.4-201ENST00000604143 237 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 AC078880.5-201ENST00000617845 421 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 MIR4251-201ENST00000635819 61 ntBASIC-0.74□□□□□ -2.53
SHANK2Q9UPX8 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.75□□□□□ -2.53
SHANK2Q9UPX8 MIR452-201ENST00000385020 85 ntBASIC-0.75□□□□□ -2.53
SHANK2Q9UPX8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.75□□□□□ -2.53
SHANK2Q9UPX8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.75□□□□□ -2.53
SHANK2Q9UPX8 AC091951.3-201ENST00000504093 246 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms