Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 RNU6-280P-201ENST00000364145 104 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH9Q9ULB4 AL445305.1-201ENST00000432577 575 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 HSPE1P13-201ENST00000451143 297 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 RNU7-94P-201ENST00000459576 63 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 AC092991.1-201ENST00000477176 376 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH9Q9ULB4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH9Q9ULB4 CYCSP23-201ENST00000519781 313 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH9Q9ULB4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.02□□□□□ -2.25
CDH9Q9ULB4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.02□□□□□ -2.25
CDH9Q9ULB4 MIR3662-201ENST00000637030 95 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CDH9Q9ULB4 RNU6-793P-201ENST00000384233 104 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 RNU6-17P-201ENST00000384245 107 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 RNU6-18P-201ENST00000384527 107 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 SNORA12.1-201ENST00000390873 148 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 RNU6-159P-201ENST00000391080 106 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 RNU6-373P-201ENST00000411247 98 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 MTND1P4-201ENST00000435196 415 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 MTND1P17-201ENST00000448961 204 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 AC091179.3-201ENST00000474761 144 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 RPL30P10-201ENST00000488148 337 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH9Q9ULB4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.01□□□□□ -2.25
CDH9Q9ULB4 MIR5695-201ENST00000579717 85 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 MIR4452-201ENST00000583004 71 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 AL162424.1-201ENST00000602325 221 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 AL021879.1-201ENST00000611756 288 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 AC073349.3-201ENST00000617616 186 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 AC009248.2-201ENST00000619826 254 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 SNORD3E-202ENST00000627253 216 ntBASIC1.01□□□□□ -2.25
CDH9Q9ULB4 Y_RNA.157-201ENST00000363638 102 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 RNU6-1059P-201ENST00000363752 98 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 RNU6-842P-201ENST00000384269 107 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 RNU6-505P-201ENST00000384427 107 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 RNU6-306P-201ENST00000384617 107 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 RNA5SP118-201ENST00000410385 109 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1□□□□□ -2.25
CDH9Q9ULB4 RPL30P16-201ENST00000419341 429 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC243428.1-201ENST00000421099 264 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 RAB28P5-201ENST00000427490 651 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC092989.1-201ENST00000481235 277 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
CDH9Q9ULB4 RNU6-718P-201ENST00000516166 105 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 UBL5P4-201ENST00000562584 236 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AL513534.2-201ENST00000603836 250 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC124303.1-201ENST00000605703 360 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC019193.3-201ENST00000609144 554 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC007014.2-201ENST00000615581 479 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1□□□□□ -2.25
CDH9Q9ULB4 AC100810.6-201ENST00000638068 285 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 AC073869.6-201ENST00000640656 341 ntBASIC1□□□□□ -2.25
CDH9Q9ULB4 Y_RNA.6-201ENST00000362350 114 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 RNU6-596P-201ENST00000365395 98 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
CDH9Q9ULB4 DYNLT3P2-201ENST00000442517 295 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 FGF7P6-202ENST00000451282 293 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.99□□□□□ -2.25
CDH9Q9ULB4 RNU6-329P-201ENST00000459618 107 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 RNU4-49P-201ENST00000516080 140 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 RNU6-566P-201ENST00000516790 107 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH9Q9ULB4 APOOP3-201ENST00000536787 586 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.99□□□□□ -2.25
CDH9Q9ULB4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.99□□□□□ -2.25
CDH9Q9ULB4 7SK.7-201ENST00000603504 247 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 AC002553.4-201ENST00000616896 331 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH9Q9ULB4 AC106754.2-201ENST00000623006 233 ntBASIC0.99□□□□□ -2.25
CDH9Q9ULB4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDH9Q9ULB4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDH9Q9ULB4 Y_RNA.179-201ENST00000363844 90 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 RNU4-76P-201ENST00000364509 141 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 Y_RNA.453-201ENST00000384223 109 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 MIR660-201ENST00000385235 97 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDH9Q9ULB4 MIR1277-201ENST00000408536 78 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 USP9YP30-201ENST00000430729 455 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 MTND4P18-201ENST00000447010 465 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.98□□□□□ -2.25
CDH9Q9ULB4 SNORD65B-201ENST00000459126 73 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 AC093303.1-201ENST00000514549 295 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 RNU6-922P-201ENST00000516753 99 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 SNORA70.22-201ENST00000517160 124 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.98□□□□□ -2.25
CDH9Q9ULB4 MIR4438-201ENST00000585271 93 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 AC018638.8-201ENST00000588755 281 ntBASIC0.98□□□□□ -2.25
CDH9Q9ULB4 AC084782.3-201ENST00000612282 578 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms