Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 RPS27P22-201ENST00000478056 241 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 AC010469.2-201ENST00000496412 480 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 SNORA31.4-201ENST00000516049 129 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 AC091144.1-201ENST00000519573 138 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP50Q9UKX7 MIR5696-201ENST00000578474 85 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 AC080078.2-201ENST00000603766 501 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 AC124303.1-201ENST00000605703 360 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 AC012676.2-201ENST00000619258 186 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 RNU6-199P-201ENST00000362954 107 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 RNY3P3-201ENST00000363816 102 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.184-201ENST00000363884 108 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.530-201ENST00000384587 101 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 MIR19B1-201ENST00000384829 87 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 MIR10B-201ENST00000385011 110 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 SNORD41-201ENST00000386967 70 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 AL355796.1-201ENST00000406706 323 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 RNU2-16P-201ENST00000410712 136 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 ZNF885P-201ENST00000420174 1098 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.86□□□□□ -2.27
NUP50Q9UKX7 MRPS10P1-201ENST00000448483 130 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 AC098826.2-201ENST00000452011 651 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.86□□□□□ -2.27
NUP50Q9UKX7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.86□□□□□ -2.27
NUP50Q9UKX7 AP000870.1-201ENST00000472927 406 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 AC093303.1-201ENST00000514549 295 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 RNU6-947P-201ENST00000516264 106 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 RNA5SP168-201ENST00000516642 112 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.86□□□□□ -2.27
NUP50Q9UKX7 RMST_2.1-201ENST00000617263 136 ntBASIC0.86□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.38-201ENST00000362617 102 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.212-201ENST00000364177 102 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 RNU6-306P-201ENST00000384617 107 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 MIR653-201ENST00000385279 96 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
NUP50Q9UKX7 RNU6-332P-201ENST00000391193 108 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 CALM2P4-201ENST00000430810 426 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 MTATP6P13-201ENST00000438531 667 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 AC245047.7-201ENST00000440265 293 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 MTND1P29-201ENST00000448112 647 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 RPS29P1-201ENST00000465274 159 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 AC134698.4-201ENST00000523451 826 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 NBR2-204ENST00000587322 63 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.85□□□□□ -2.27
NUP50Q9UKX7 MIR6079-201ENST00000635807 62 ntBASIC0.85□□□□□ -2.27
NUP50Q9UKX7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
NUP50Q9UKX7 RNU5F-3P-201ENST00000363767 117 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC243428.1-201ENST00000421099 264 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC002429.1-201ENST00000437672 148 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 RPS4XP11-201ENST00000446897 772 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC010598.1-201ENST00000510378 103 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 RNU6-917P-201ENST00000516294 104 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 RNU6-107P-201ENST00000516643 102 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC090049.2-201ENST00000550377 109 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.84□□□□□ -2.27
NUP50Q9UKX7 7SK.7-201ENST00000603504 247 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 SNORA28-201ENST00000606769 126 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC010999.1-201ENST00000611856 324 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 MIR6788-201ENST00000618842 66 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 AC006435.5-201ENST00000624486 112 ntBASIC0.84□□□□□ -2.27
NUP50Q9UKX7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.265-201ENST00000364677 108 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.414-201ENST00000384011 101 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.533-201ENST00000384596 114 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 U8.16-201ENST00000391279 133 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 AC093850.1-201ENST00000454121 251 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.83□□□□□ -2.28
NUP50Q9UKX7 RNU7-175P-201ENST00000515915 61 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 SNORD79.1-201ENST00000516069 84 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 MIR151B-201ENST00000584249 96 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.83□□□□□ -2.28
NUP50Q9UKX7 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 MIR6767-201ENST00000637302 66 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 MIR1321-201ENST00000637766 79 ntBASIC0.83□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.124-201ENST00000363339 93 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 SNORD116-11-201ENST00000383882 92 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.405-201ENST00000383979 100 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.451-201ENST00000384200 100 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 RNU6-424P-201ENST00000384367 105 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.524-201ENST00000384564 100 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.561-201ENST00000384694 100 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 AC114482.1-201ENST00000418010 247 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.82□□□□□ -2.28
NUP50Q9UKX7 MTND1P1-201ENST00000445453 368 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.82□□□□□ -2.28
NUP50Q9UKX7 AC097462.1-201ENST00000514125 324 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 RNU7-172P-201ENST00000517125 64 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 AC136932.1-201ENST00000574771 208 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms