Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU6-914P-201ENST00000516749 109 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AC091178.2-201ENST00000584401 117 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AC012433.1-201ENST00000588916 398 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 U7.6-201ENST00000610841 64 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AC005002.2-201ENST00000438228 269 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 RNU6-881P-201ENST00000516813 102 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 RNA5SP66-201ENST00000517178 101 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 MIR4264-201ENST00000583520 66 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 SNORA63C-201ENST00000364578 129 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 SPINT5P-201ENST00000448174 155 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 RNU7-136P-201ENST00000458819 69 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 AC025647.1-201ENST00000517879 253 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 DEFB108A-201ENST00000530110 222 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 MIR4677-201ENST00000584153 80 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 AP000753.3-201ENST00000604083 169 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 AC068792.1-201ENST00000621354 417 ntBASIC-1.12□□□□□ -2.59
SCN11AQ9UI33 U3.4-201ENST00000363352 213 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 RNU6-343P-201ENST00000364709 104 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 MIR10A-201ENST00000385043 110 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 MTND2P20-201ENST00000440805 661 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC074290.1-201ENST00000448883 135 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 MTND1P31-201ENST00000449206 961 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AP002802.2-201ENST00000605877 235 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 MIR6738-201ENST00000619620 64 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC093726.3-201ENST00000637588 150 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC099786.3-201ENST00000565735 1410 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AL355143.1-201ENST00000407101 841 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 MIR548L-201ENST00000408303 86 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC079781.2-201ENST00000446424 169 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC091951.3-201ENST00000504093 246 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 RNA5SP47-201ENST00000517230 109 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC087894.1-201ENST00000538359 518 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC124016.2-201ENST00000610058 665 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 AC138649.3-201ENST00000622154 254 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 U4.7-201ENST00000638126 106 ntBASIC-1.13□□□□□ -2.59
SCN11AQ9UI33 RNU4-36P-201ENST00000364294 144 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 SNORA51.10-201ENST00000384418 136 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 RNU6-1005P-201ENST00000384519 107 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 MIR1298-201ENST00000408783 112 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 AC006210.1-201ENST00000424882 111 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 RNU7-156P-201ENST00000517214 74 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 MTND1P8-201ENST00000571424 950 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 AC090617.3-201ENST00000573670 475 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 MIR4441-201ENST00000582623 100 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 AC006441.5-201ENST00000612680 209 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 AC120349.2-201ENST00000625002 298 ntBASIC-1.14□□□□□ -2.59
SCN11AQ9UI33 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 RNU6-125P-201ENST00000384505 107 ntBASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 MIR586-201ENST00000385035 97 ntBASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 MCFD2P1-201ENST00000417812 300 ntBASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 AC046134.1-201ENST00000514454 666 ntBASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 RN7SKP19-201ENST00000516016 252 ntBASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 RNU6-64P-201ENST00000517119 105 ntBASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 AP001330.5-201ENST00000607176 411 ntBASIC-1.15□□□□□ -2.59
SCN11AQ9UI33 AC117470.1-201ENST00000381974 330 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 SNORD65C-201ENST00000390962 71 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 AC010975.2-201ENST00000427781 588 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 RNU7-128P-201ENST00000517247 62 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 AL512347.1-201ENST00000566420 503 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 AC138915.2-201ENST00000569776 97 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 MIR378D2-201ENST00000580636 98 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 MIR4306-201ENST00000583390 91 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 AL359999.1-201ENST00000604513 294 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 snoZ196.1-201ENST00000625269 89 ntBASIC-1.16□□□□□ -2.59
SCN11AQ9UI33 RNU6-40P-201ENST00000384254 107 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 MIR204-201ENST00000385200 110 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 AC090960.1-201ENST00000421072 306 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 RNU6-760P-201ENST00000516078 97 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 AL359547.2-201ENST00000615810 418 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 MIR1264-201ENST00000616374 69 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 MIR4251-201ENST00000635819 61 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 ZNF204P-201ENST00000416749 2397 ntBASIC-1.16□□□□□ -2.6
SCN11AQ9UI33 RNA5SP192-201ENST00000364404 120 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 RNU6-384P-201ENST00000364900 104 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 RNU6-116P-201ENST00000384042 109 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 SNORD28-201ENST00000384706 75 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 MIR873-201ENST00000401120 77 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 AL355994.1-201ENST00000424379 260 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 RNU6-341P-201ENST00000516973 96 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms