Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
APOBEC3BQ9UH17 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 Y_RNA.327-201ENST00000365201 102 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 Y_RNA.577-201ENST00000384794 101 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 MIR329-1-201ENST00000385028 80 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 AC016909.1-201ENST00000415916 166 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 MTCO2P27-201ENST00000420740 428 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 Y_RNA.683-201ENST00000516508 93 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 RNU6-699P-201ENST00000517081 110 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 AC091144.1-201ENST00000519573 138 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 LARP7P1-201ENST00000605576 316 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 AC133104.2-201ENST00000615272 193 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 AC126177.8-201ENST00000618339 1015 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 snoZ196.1-201ENST00000625269 89 ntBASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
APOBEC3BQ9UH17 RNU6-1040P-201ENST00000383974 107 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 RNU6-318P-201ENST00000384283 103 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 MIR30A-201ENST00000385092 71 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 AL117342.1-201ENST00000404861 406 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 AC074290.1-201ENST00000448883 135 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 RNU2-34P-201ENST00000516534 121 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 RNU6-107P-201ENST00000516643 102 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 AC073544.1-201ENST00000600110 1595 ntBASIC1.42□□□□□ -2.18
APOBEC3BQ9UH17 RNU4-79P-201ENST00000362764 141 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 SNORA33-201ENST00000363664 130 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 RNU5F-3P-201ENST00000363767 117 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 RNU5E-4P-201ENST00000364931 120 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 RNU6-867P-201ENST00000364956 107 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 Y_RNA.314-201ENST00000365114 102 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 MIR625-201ENST00000385047 85 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 RNA5SP100-201ENST00000410903 110 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 RNA5SP59-201ENST00000410922 110 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 AC114482.1-201ENST00000418010 247 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 AF228730.4-201ENST00000421457 183 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 AC096644.2-201ENST00000429278 159 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 HMGN2P34-201ENST00000437647 269 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 RNU7-152P-201ENST00000458982 64 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 AC025647.1-201ENST00000517879 253 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 AL117336.2-201ENST00000602435 335 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
APOBEC3BQ9UH17 RNU6-1301P-201ENST00000362724 104 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 U3.8-201ENST00000363675 217 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 Y_RNA.187-201ENST00000363918 113 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 RNU1-96P-201ENST00000364163 162 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 RNU6-1145P-201ENST00000384246 107 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 Y_RNA.463-201ENST00000384271 102 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 RNU6-417P-201ENST00000384712 107 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 SNORA69.1-201ENST00000390904 137 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 MIR1185-2-201ENST00000408687 86 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 Y_RNA.592-201ENST00000410274 109 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 AC009310.1-201ENST00000414414 451 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 AC236972.2-201ENST00000434979 310 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 UQCRBP2-201ENST00000447827 297 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 CHEK2P4-201ENST00000450340 246 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 RNU6-221P-201ENST00000459541 99 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 AC010409.1-201ENST00000487382 476 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 SUB1P4-201ENST00000566062 339 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 AC080078.3-201ENST00000605407 463 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 AC104985.2-201ENST00000620598 500 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 MIR338-201ENST00000636369 67 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 MTND5P10-201ENST00000603719 1809 ntBASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
APOBEC3BQ9UH17 snoU2-30.2-201ENST00000362805 70 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 RNU6-490P-201ENST00000362985 107 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 Y_RNA.146-201ENST00000363549 102 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 Y_RNA.226-201ENST00000364337 114 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 Y_RNA.287-201ENST00000364853 94 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 Y_RNA.315-201ENST00000365117 102 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 MT-TD-201ENST00000387419 68 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 Y_RNA.579-201ENST00000390939 94 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 ELOCP21-201ENST00000412558 336 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 UBE2V1P7-201ENST00000446395 340 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 AC010900.2-201ENST00000604508 210 ntBASIC1.39□□□□□ -2.19
APOBEC3BQ9UH17 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms