Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 MTND1P4-201ENST00000435196 415 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 RPS27P1-201ENST00000450552 247 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 RNU7-99P-201ENST00000516271 62 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.708-201ENST00000516950 96 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 AC091144.1-201ENST00000519573 138 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 AC093023.1-201ENST00000547375 507 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 AL929325.1-201ENST00000603096 117 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 AC006435.5-201ENST00000624486 112 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 MTND5P16-201ENST00000460269 1703 ntBASIC1.09□□□□□ -2.24
CLCF1Q9UBD9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 Y_RNA.364-201ENST00000365532 101 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 RNU6-601P-201ENST00000384540 107 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 MIR513A1-201ENST00000385138 129 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 RNA5SP247-201ENST00000411181 105 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 RPS27P16-201ENST00000425758 201 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AL606517.2-201ENST00000442855 241 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 RNU7-94P-201ENST00000459576 63 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC099513.1-201ENST00000490423 301 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 HMGN1P7-201ENST00000491722 313 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC069439.1-201ENST00000494739 167 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC018710.1-201ENST00000506509 158 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC046134.1-201ENST00000514454 666 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC004584.2-201ENST00000570407 410 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC022217.4-201ENST00000604389 163 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 PRR13P7-201ENST00000605538 430 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 AC005014.2-201ENST00000607795 599 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
CLCF1Q9UBD9 RNY1P16-201ENST00000363063 111 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 Y_RNA.473-201ENST00000384333 102 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 Y_RNA.482-201ENST00000384377 111 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 MRPL42P3-201ENST00000401492 326 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 RPL37P10-201ENST00000412884 288 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 SNX2P2-201ENST00000424553 323 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 EIF1P2-201ENST00000428233 350 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC245047.3-201ENST00000429428 127 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AL135790.2-201ENST00000437701 267 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC005002.2-201ENST00000438228 269 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 UBE2V1P7-201ENST00000446395 340 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 FGF7P6-202ENST00000451282 293 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 SNORD65B-201ENST00000459126 73 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 RNU7-87P-201ENST00000459343 62 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC010598.1-201ENST00000510378 103 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 Y_RNA.670-201ENST00000516255 105 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC105029.1-201ENST00000520250 669 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 MIR3684-201ENST00000579779 74 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC005899.2-201ENST00000584353 90 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC080078.2-201ENST00000603766 501 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC040896.1-201ENST00000613819 479 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AL078604.3-201ENST00000615580 211 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 PISRT1.1-201ENST00000616930 107 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 MIR8054-201ENST00000620877 86 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 AC091895.1-201ENST00000624494 256 ntBASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLCF1Q9UBD9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 Y_RNA.339-201ENST00000365325 102 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 RNA5SP259-201ENST00000365541 109 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 RNU6-1264P-201ENST00000383891 107 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 RNU11-5P-201ENST00000391216 129 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 RNU6-1001P-201ENST00000411265 100 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 AC010154.1-201ENST00000425857 269 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 UQCRBP2-201ENST00000447827 297 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 RPL31P58-201ENST00000469001 379 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 RPS27P22-201ENST00000478056 241 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 RNU6-307P-201ENST00000516743 106 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 RNU7-128P-201ENST00000517247 62 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 AC005668.1-201ENST00000571142 476 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 MIR4438-201ENST00000585271 93 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 AC021506.2-201ENST00000612354 169 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.06□□□□□ -2.24
CLCF1Q9UBD9 SNORA25.9-201ENST00000365087 128 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 RNU6-767P-201ENST00000384132 107 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 MIR329-1-201ENST00000385028 80 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 RNU6-440P-201ENST00000390882 105 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 MIR1276-201ENST00000408707 83 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms